C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164683-ENSG00000147586 CGP 9606 8:79764010-80030289
GeneTranscriptPositionBiotype
ENSG00000147586 (MRPS28)
mitochondrial ribosomal protein S28 		ENST00000276585 (MRPS28-001) 79918717-80030271 protein_coding
ENST00000518271 (MRPS28-012) 79919125-80030232 protein_coding
ENST00000518371 (MRPS28-002) 79957803-80003148 protein_coding
ENST00000519120 (MRPS28-008) 79918988-80029964 protein_coding
ENST00000519386 (MRPS28-011) 79918855-80029839 protein_coding
ENST00000520946 (MRPS28-009) 79919032-80029974 protein_coding
ENST00000521434 (MRPS28-010) 79918940-80029912 protein_coding
ENST00000521605 (MRPS28-007) 79918966-80030289 protein_coding
ENST00000522987 (MRPS28-013) 79958272-80030254 processed_transcript
ENSG00000164683 (HEY1)
hes-related family bHLH transcription factor with YRPW motif 1 		ENST00000337919 (HEY1-009) 79764013-79767857 protein_coding
ENST00000354724 (HEY1-001) 79764010-79767863 protein_coding
ENST00000435063 (HEY1-003) 79764494-79766493 processed_transcript
ENST00000518733 (HEY1-006) 79765431-79767472 protein_coding
ENST00000519075 (HEY1-005) 79766934-79767760 retained_intron
ENST00000521111 (HEY1-008) 79766767-79767784 retained_intron
ENST00000523531 (HEY1-007) 79767010-79767857 retained_intron
ENST00000523976 (HEY1-004) 79764720-79766475 protein_coding
ENSG00000249328 (RP11-26J3.1)
 ENST00000502766 (RP11-26J3.1-001) 79769372-79871737 lincRNA
ENST00000517365 (RP11-26J3.1-002) 79820569-79871759 lincRNA
ENSG00000272138 (RP11-27N21.3)
 ENST00000607172 (RP11-27N21.3-001) 79768142-79802842 lincRNA
ENST00000607754 (RP11-27N21.3-002) 79783729-79802799 lincRNA
ENSG00000272518 (RP11-26J3.3)
 ENST00000606512 (RP11-26J3.3-001) 79956465-79957381 sense_intronic
CIL_0002OV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040289-ENSMUSG00000040269 CGP 10090 3:8663362-8923918
GeneTranscriptPositionBiotype
ENSMUSG00000040269 (Mrps28)
mitochondrial ribosomal protein S28 		ENSMUST00000042148 (Mrps28-001) 8802146-8923918 protein_coding
ENSMUSG00000040289 (Hey1)
hairy/enhancer-of-split related with YRPW motif 1 		ENSMUST00000042412 (Hey1-201) 8663362-8667039 protein_coding
ENSMUSG00000081594 (Gm15467)
predicted gene 15467 		ENSMUST00000120582 (Gm15467-001) 8881199-8881643 processed_pseudogene
ENSMUSG00000081657 (Gm15466)
predicted gene 15466 		ENSMUST00000122299 (Gm15466-001) 8882238-8882570 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OV_0001ENSG00000147586ENST00000276585ENST00000518271ENST00000518371ENST00000519120ENST00000519386ENST00000520946ENST00000521434ENST00000521605ENST00000522987ENSG00000164683ENST00000337919ENST00000354724ENST00000435063ENST00000518733ENST00000519075ENST00000521111ENST00000523531ENST00000523976ENSG00000249328ENST00000502766ENST00000517365ENSG00000272138ENST00000607172ENST00000607754ENSG00000272518ENST00000606512CIL_0002OV_0002ENSMUSG00000040269ENSMUST00000042148ENSMUSG00000040289ENSMUST00000042412ENSMUSG00000081594ENSMUST00000120582ENSMUSG00000081657ENSMUST00000122299
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OV_0001ENSG00000147586ENST00000276585ENST00000519120ENST00000519386ENST00000521434ENST00000521605ENSG00000164683ENST00000337919ENST00000354724ENST00000435063ENST00000518733ENST00000521111ENST00000523531ENSG00000249328ENST00000502766ENST00000517365ENSG00000272138ENST00000607172ENST00000607754ENSG00000272518ENST00000606512CIL_0002OV_0002ENSMUSG00000040269ENSMUST00000042148ENSMUSG00000040289ENSMUST00000042412ENSMUSG00000081594ENSMUST00000120582ENSMUSG00000081657ENSMUST00000122299
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147586 ENST00000276585 5.436±0.00 17.773±0.00 N/A N/A 13.686±0.00 10.261±0.00 11.564±10.07 23.017±0.00 25.037±0.00 6.827±0.00 6.829±3.28 13.120±1.02 17.705±3.47 10.336±0.00
ENST00000518271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519120 N/A N/A N/A N/A N/A N/A 8.692±0.00 21.476±0.00 N/A N/A 24.156±0.00 162.399±0.00 50.000±0.00 35.784±0.00
ENST00000519386 5.208±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.321±0.00 27.253±0.00
ENST00000521605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.071±0.00 N/A N/A N/A
ENST00000522987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164683 ENST00000337919 N/A 1.267±0.00 N/A 2.045±1.42 2.370±0.00 N/A N/A N/A N/A 1.393±0.44 N/A 0.357±0.00 1.625±0.00 N/A
ENST00000354724 13.259±0.00 3.501±0.00 N/A 7.467±3.04 3.347±0.00 2.727±2.48 3.727±3.34 2.441±0.00 0.279±0.00 4.792±0.00 3.335±3.09 2.710±2.38 8.842±2.06 6.090±2.01
ENST00000435063 N/A N/A N/A N/A 0.677±0.00 N/A N/A N/A N/A N/A 2.194±0.00 N/A 3.126±0.00 1.549±0.00
ENST00000518733 N/A N/A 1.148±0.00 N/A N/A 0.272±0.00 0.616±0.00 N/A 1.655±0.00 0.786±0.00 1.104±0.00 0.595±0.00 N/A N/A
ENST00000519075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521111 N/A N/A N/A N/A 2.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523531 N/A N/A N/A N/A N/A 0.719±0.00 0.457±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000523976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249328 ENST00000502766 0.029±0.00 0.139±0.00 N/A N/A 0.064±0.00 0.065±0.00 0.029±0.00 0.032±0.00 0.014±0.00 N/A N/A 0.049±0.00 0.023±0.00 0.187±0.03
ENST00000517365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A 0.174±0.00
ENSG00000272138 ENST00000607172 N/A 0.168±0.00 N/A 0.164±0.00 N/A 0.203±0.00 N/A N/A N/A N/A N/A 0.281±0.15 0.219±0.00 0.257±0.00
ENST00000607754 N/A N/A N/A 0.315±0.23 N/A N/A 0.067±0.00 0.100±0.00 N/A 0.339±0.00 0.139±0.00 0.107±0.04 N/A 0.849±0.29
ENSG00000272518 ENST00000606512 0.898±0.00 1.478±0.00 1.234±0.00 0.465±0.30 0.580±0.02 0.449±0.20 0.347±0.05 0.697±0.36 0.700±0.11 0.769±0.57 0.044±0.00 1.104±0.62 0.280±0.20 0.349±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040269 ENSMUST00000042148 27.590±3.26 61.887±5.59 27.441±5.21 13.898±2.55 28.546±7.03 24.966±1.28 43.274±5.03 30.184±1.62 41.581±15.59 21.151±1.78 58.928±4.60 28.951±3.81 31.348±13.37 9.288±2.43
ENSMUSG00000040289 ENSMUST00000042412 9.395±2.77 3.821±1.14 2.787±0.00 10.762±2.84 14.308±5.49 2.703±0.57 4.465±1.04 1.284±0.13 0.494±0.28 50.835±9.10 1.621±0.33 8.594±3.24 0.893±0.24 2.014±0.91
ENSMUSG00000081594 ENSMUST00000120582 0.254±0.00 N/A 0.147±0.00 0.144±0.03 N/A 0.485±0.29 N/A 0.288±0.13 0.081±0.03 0.532±0.00 0.151±0.00 0.430±0.20 0.216±0.03 0.320±0.17
ENSMUSG00000081657 ENSMUST00000122299 0.323±0.09 N/A 0.468±0.09 0.837±0.00 N/A N/A 0.214±0.00 N/A 0.319±0.24 0.255±0.02 N/A 0.995±0.35 0.561±0.32 0.308±0.10

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