C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15467
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120582 Gm15467-001 ENSMUSG00000081594 10090 + 3:8881199-8881643 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120582
Transcript ID Adipose Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120582 0.254±0.00 0.147±0.00 0.144±0.03 0.485±0.29 0.288±0.13 0.081±0.03 0.532±0.00 0.151±0.00 0.430±0.20 0.216±0.03 0.320±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LP CIL_0008LP_0002 VISTA 3:8565055-9167293
CIL_0002OV CIL_0002OV_0002 CGP 3:8663362-8923918

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 300
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 265
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 278
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 300
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 300
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 324
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 300
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 6e-39 165
ENST00000488409 RPL29P2-001 transcribed_processed_pseudogene Homo_sapiens 0 228
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 300
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 300
ENST00000498671 RPL29P2-002 processed_transcript Homo_sapiens 0 228

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