C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15466
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122299 Gm15466-001 ENSMUSG00000081657 10090 - 3:8882238-8882570 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartLiverLungOvaryPlacentaTestisENSMUST00000122299
Transcript ID Adipose Bladder Brain Heart Liver Lung Ovary Placenta Testis
ENSMUST00000122299 0.323±0.09 0.468±0.09 0.837±0.00 0.214±0.00 0.319±0.24 0.255±0.02 0.995±0.35 0.561±0.32 0.308±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LP CIL_0008LP_0002 VISTA 3:8565055-9167293
CIL_0002OV CIL_0002OV_0002 CGP 3:8663362-8923918

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341369 PTMA-002 protein_coding Homo_sapiens 0 416
ENST00000397729 PTMAP8-001 processed_pseudogene Homo_sapiens 0 322
ENST00000409115 PTMA-001 protein_coding Homo_sapiens 0 407
ENST00000409321 PTMA-012 protein_coding Homo_sapiens 0 396
ENST00000409683 PTMA-007 protein_coding Homo_sapiens 0 355
ENST00000410064 PTMA-004 protein_coding Homo_sapiens 0 361
ENST00000412128 PTMA-008 protein_coding Homo_sapiens 0 351
ENST00000448874 PTMA-011 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000466801 PTMA-013 processed_transcript Homo_sapiens 0 355
ENST00000467816 PTMA-010 retained_intron Homo_sapiens 0 206
ENST00000468027 PTMA-006 retained_intron Homo_sapiens 0 348
ENST00000481928 PTMA-003 retained_intron Homo_sapiens 0 294
ENST00000612829 PTMA-201 protein_coding Homo_sapiens 0 355

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