C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002TP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070353-ENSDARG00000070352 CGP 7955 23:36104488-36116726
GeneTranscriptPositionBiotype
ENSDARG00000070353 (hoxc13a)
homeo box C13a
ENSDART00000103149 (hoxc13a-001) 36104488-36107430 protein_coding
CIL_0002TP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123364-ENSG00000123407 CGP 9606 12:53938765-53958956
GeneTranscriptPositionBiotype
ENSG00000123364 (HOXC13)
homeobox C13
ENST00000243056 (HOXC13-001) 53938765-53946544 protein_coding
ENSG00000123407 (HOXC12)
homeobox C12
ENST00000243103 (HOXC12-001) 53954834-53958956 protein_coding
ENSG00000249641 (HOXC13-AS)
HOXC13 antisense RNA
ENST00000512916 (HOXC13-AS-001) 53935328-53939643 antisense
CIL_0002TP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001655-ENSMUSG00000050328 CGP 10090 15:102921103-102938609
GeneTranscriptPositionBiotype
ENSMUSG00000001655 (Hoxc13)
homeobox C13
ENSMUST00000001700 (Hoxc13-001) 102921103-102928814 protein_coding
ENSMUSG00000050328 (Hoxc12)
homeobox C12
ENSMUST00000055562 (Hoxc12-001) 102936757-102938609 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyMuscleOvaryPlacentaTestisCIL_0002TP_0001ENSDARG00000070353ENSDART00000103149CIL_0002TP_0002ENSG00000123364ENST00000243056ENSG00000123407ENST00000243103ENSG00000249641ENST00000512916CIL_0002TP_0003ENSMUSG00000001655ENSMUST00000001700ENSMUSG00000050328ENSMUST00000055562
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyMuscleOvaryPlacentaTestisCIL_0002TP_0001ENSDARG00000070353ENSDART00000103149CIL_0002TP_0002ENSG00000123364ENST00000243056ENSG00000123407ENST00000243103ENSG00000249641ENST00000512916CIL_0002TP_0003ENSMUSG00000001655ENSMUST00000001700ENSMUSG00000050328ENSMUST00000055562
Gene Transcript Adipose Adrenal Bladder Brain Breast Heart Kidney Muscle Ovary Placenta Testis
ENSDARG00000070353 ENSDART00000103149 N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Heart Kidney Muscle Ovary Placenta Testis
ENSG00000123364 ENST00000243056 0.206±0.00 0.696±0.00 N/A N/A 0.271±0.00 N/A 0.077±0.00 N/A 0.913±0.40 0.216±0.12 0.549±0.16
ENSG00000123407 ENST00000243103 0.941±0.00 1.156±0.00 N/A N/A 0.167±0.00 0.084±0.00 N/A 0.019±0.00 0.542±0.61 0.136±0.11 0.132±0.08
ENSG00000249641 ENST00000512916 0.089±0.00 0.402±0.00 N/A N/A 0.260±0.00 N/A N/A N/A N/A 0.050±0.00 0.057±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Heart Kidney Muscle Ovary Placenta Testis
ENSMUSG00000001655 ENSMUST00000001700 N/A N/A 0.061±0.01 0.037±0.01 0.048±0.00 N/A N/A 0.039±0.03 0.022±0.00 0.234±0.15 0.012±0.00
ENSMUSG00000050328 ENSMUST00000055562 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.048±0.02

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