C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000347_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158417-ENSG00000135945 CGP 9606 2:99337353-99490035
GeneTranscriptPositionBiotype
ENSG00000115514 (TXNDC9)
thioredoxin domain containing 9 		ENST00000264255 (TXNDC9-001) 99318982-99336462 protein_coding
ENST00000409434 (TXNDC9-002) 99321534-99336333 protein_coding
ENST00000409705 (TXNDC9-004) 99322111-99340702 protein_coding
ENST00000422767 (TXNDC9-009) 99319508-99333242 nonsense_mediated_decay
ENST00000434323 (TXNDC9-006) 99322063-99336385 protein_coding
ENST00000438680 (TXNDC9-008) 99321944-99336333 nonsense_mediated_decay
ENST00000463385 (TXNDC9-003) 99321561-99336310 retained_intron
ENST00000465183 (TXNDC9-007) 99332762-99336356 retained_intron
ENST00000477337 (TXNDC9-005) 99336337-99340696 processed_transcript
ENSG00000135945 (REV1)
REV1, polymerase (DNA directed) 		ENST00000258428 (REV1-001) 99400475-99490035 protein_coding
ENST00000393445 (REV1-002) 99400475-99489973 protein_coding
ENST00000413697 (REV1-003) 99400950-99490035 nonsense_mediated_decay
ENST00000438366 (REV1-012) 99405928-99410850 nonsense_mediated_decay
ENST00000450415 (REV1-007) 99424781-99438727 protein_coding
ENST00000465086 (REV1-016) 99402530-99403430 retained_intron
ENST00000465835 (REV1-005) 99403056-99451480 processed_transcript
ENST00000472000 (REV1-014) 99405933-99406928 retained_intron
ENST00000473819 (REV1-004) 99438574-99462788 retained_intron
ENST00000477121 (REV1-013) 99406084-99408403 retained_intron
ENST00000481719 (REV1-010) 99418832-99424634 retained_intron
ENST00000482595 (REV1-011) 99402259-99412953 processed_transcript
ENST00000482887 (REV1-006) 99435837-99438777 processed_transcript
ENST00000485487 (REV1-015) 99403040-99406353 retained_intron
ENST00000486117 (REV1-009) 99431801-99438817 processed_transcript
ENST00000491752 (REV1-008) 99435475-99438680 retained_intron
ENSG00000158417 (EIF5B)
eukaryotic translation initiation factor 5B 		ENST00000289371 (EIF5B-001) 99337353-99401326 protein_coding
ENST00000470023 (EIF5B-002) 99397047-99399774 retained_intron
ENST00000470868 (EIF5B-003) 99389607-99390690 retained_intron
ENST00000494190 (EIF5B-004) 99394809-99399197 retained_intron
ENST00000617677 (EIF5B-201) 99337371-99400265 protein_coding
ENSG00000273306 (RP11-527J8.1)
 ENST00000608144 (RP11-527J8.1-001) 99405218-99405843 antisense
CIL_000347_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026083-ENSMUSG00000026082 CGP 10090 1:37998010-38129662
GeneTranscriptPositionBiotype
ENSMUSG00000026082 (Rev1)
REV1 homolog (S. cerevisiae) 		ENSMUST00000027251 (Rev1-201) 38052787-38129662 protein_coding
ENSMUSG00000026083 (Eif5b)
eukaryotic translation initiation factor 5B 		ENSMUST00000027252 (Eif5b-201) 37998010-38055579 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000347_0001ENSG00000115514ENST00000264255ENST00000409434ENST00000409705ENST00000422767ENST00000434323ENST00000438680ENST00000463385ENST00000465183ENST00000477337ENSG00000135945ENST00000258428ENST00000393445ENST00000413697ENST00000438366ENST00000450415ENST00000465086ENST00000465835ENST00000472000ENST00000473819ENST00000477121ENST00000481719ENST00000482595ENST00000482887ENST00000485487ENST00000486117ENST00000491752ENSG00000158417ENST00000289371ENST00000470023ENST00000470868ENST00000494190ENST00000617677ENSG00000273306ENST00000608144CIL_000347_0002ENSMUSG00000026082ENSMUST00000027251ENSMUSG00000026083ENSMUST00000027252
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000347_0001ENSG00000115514ENST00000264255ENSG00000135945ENST00000258428ENST00000393445ENST00000413697ENST00000465835ENSG00000158417ENST00000289371ENST00000617677ENSG00000273306ENST00000608144CIL_000347_0002ENSMUSG00000026082ENSMUST00000027251ENSMUSG00000026083ENSMUST00000027252
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115514 ENST00000264255 6.816±0.00 14.570±0.00 4.414±0.00 8.024±0.00 8.667±2.14 8.673±2.89 5.162±2.37 13.496±8.23 5.053±0.32 6.544±0.21 4.235±1.27 16.518±5.06 7.906±0.79 11.358±0.00
ENST00000409434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135945 ENST00000258428 N/A N/A N/A 3.302±0.67 N/A N/A 1.995±0.00 1.709±0.00 N/A 3.414±0.00 N/A 6.539±0.00 2.167±0.00 N/A
ENST00000393445 N/A N/A N/A N/A 3.902±0.00 4.393±0.00 1.306±0.00 N/A 4.165±0.00 3.981±0.62 2.646±0.00 4.144±0.00 N/A N/A
ENST00000413697 N/A N/A 1.766±0.00 N/A N/A N/A N/A N/A N/A 2.411±0.00 N/A 3.739±0.00 N/A N/A
ENST00000438366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465835 N/A N/A 3.271±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000158417 ENST00000289371 N/A N/A N/A 0.668±0.00 1.348±0.00 N/A N/A 1.006±0.00 1.276±0.00 1.634±0.00 0.805±0.00 7.559±6.11 9.980±0.00 N/A
ENST00000470023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617677 17.167±0.00 15.833±0.00 1.184±0.00 10.814±0.00 2.032±0.00 1.274±0.00 7.714±7.04 N/A N/A N/A N/A 9.719±5.51 4.223±0.08 N/A
ENSG00000273306 ENST00000608144 0.560±0.00 2.228±0.00 0.268±0.00 0.640±0.11 0.832±0.49 2.071±1.28 0.695±0.25 0.780±0.19 0.521±0.09 0.717±0.00 1.307±0.23 2.420±1.90 0.081±0.01 0.985±0.58
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026082 ENSMUST00000027251 3.368±1.34 2.340±0.82 7.228±0.23 9.785±0.57 2.500±0.56 1.825±0.32 2.357±0.25 2.343±0.77 5.561±3.14 2.299±0.49 5.394±0.58 5.307±2.77 6.111±0.53 9.122±0.36
ENSMUSG00000026083 ENSMUST00000027252 1.986±0.13 2.797±0.50 5.827±2.11 11.226±6.67 1.655±0.39 1.542±0.27 2.846±0.19 2.302±0.36 3.717±1.93 2.644±0.68 5.866±3.06 6.686±10.15 24.397±13.21 12.364±11.39

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