C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00039C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163599-ENSG00000163600 CGP 9606 2:203867786-203961577
GeneTranscriptPositionBiotype
ENSG00000163599 (CTLA4)
cytotoxic T-lymphocyte-associated protein 4 		ENST00000295854 (CTLA4-005) 203867943-203872775 protein_coding
ENST00000302823 (CTLA4-001) 203867786-203873960 protein_coding
ENST00000427473 (CTLA4-002) 203870232-203873185 protein_coding
ENST00000472206 (CTLA4-004) 203867943-203872812 protein_coding
ENST00000487393 (CTLA4-003) 203867943-203872812 processed_transcript
ENSG00000163600 (ICOS)
inducible T-cell co-stimulator 		ENST00000316386 (ICOS-001) 203936748-203961577 protein_coding
ENST00000435193 (ICOS-002) 203936780-203961577 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00039C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026011-ENSMUSG00000026009 CGP 10090 1:60887000-61000320
GeneTranscriptPositionBiotype
ENSMUSG00000026009 (Icos)
inducible T cell co-stimulator 		ENSMUST00000027162 (Icos-002) 60977927-60995797 protein_coding
ENSMUST00000102827 (Icos-001) 60977927-61000320 protein_coding
ENSMUSG00000026011 (Ctla4)
cytotoxic T-lymphocyte-associated protein 4 		ENSMUST00000027164 (Ctla4-001) 60909025-60915832 protein_coding
ENSMUST00000097720 (Ctla4-002) 60909171-60914769 protein_coding
ENSMUST00000124816 (Ctla4-004) 60887000-60912716 processed_transcript
ENSMUSG00000080800 (Gm11582)
predicted gene 11582 		ENSMUST00000121041 (Gm11582-001) 60948230-60948465 processed_pseudogene
ENSMUSG00000081382 (Rpl18-ps1)
ribosomal protein L18, pseudogene 1 		ENSMUST00000121555 (Rpl18-ps1-001) 60900898-60901422 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039C_0001ENSG00000163599ENST00000295854ENST00000302823ENST00000427473ENST00000472206ENST00000487393ENSG00000163600ENST00000316386ENST00000435193CIL_00039C_0002ENSMUSG00000026009ENSMUST00000027162ENSMUST00000102827ENSMUSG00000026011ENSMUST00000027164ENSMUST00000097720ENSMUST00000124816ENSMUSG00000080800ENSMUST00000121041ENSMUSG00000081382ENSMUST00000121555
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039C_0001ENSG00000163599ENST00000295854ENST00000302823ENST00000427473ENSG00000163600ENST00000316386ENST00000435193CIL_00039C_0002ENSMUSG00000026009ENSMUST00000027162ENSMUST00000102827ENSMUSG00000026011ENSMUST00000027164ENSMUST00000097720ENSMUST00000124816ENSMUSG00000080800ENSMUST00000121041ENSMUSG00000081382ENSMUST00000121555
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163599 ENST00000295854 N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A N/A 1.625±0.00 N/A 0.189±0.00 N/A N/A
ENST00000302823 0.046±0.00 0.499±0.00 N/A 0.122±0.00 0.488±0.00 N/A 0.040±0.00 N/A 0.010±0.00 N/A N/A 0.276±0.20 0.084±0.03 0.290±0.12
ENST00000427473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.364±0.09 0.043±0.00 0.397±0.00
ENST00000472206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163600 ENST00000316386 N/A 0.929±0.00 N/A N/A 0.214±0.11 N/A N/A N/A 0.247±0.00 0.470±0.12 N/A 0.089±0.06 0.032±0.00 N/A
ENST00000435193 N/A 0.169±0.00 N/A N/A N/A 0.044±0.00 0.035±0.00 0.091±0.00 0.017±0.00 N/A N/A 0.079±0.04 0.018±0.00 0.115±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026009 ENSMUST00000027162 N/A N/A N/A 0.051±0.00 N/A 0.111±0.02 0.048±0.00 0.094±0.00 0.178±0.08 N/A N/A 0.139±0.10 0.087±0.00 0.024±0.00
ENSMUST00000102827 0.277±0.04 0.079±0.04 0.077±0.00 0.039±0.02 2.686±0.76 0.148±0.08 0.131±0.03 0.141±0.08 0.317±0.13 0.458±0.18 0.075±0.10 0.090±0.04 0.091±0.03 0.059±0.02
ENSMUSG00000026011 ENSMUST00000027164 0.043±0.03 0.109±0.04 0.065±0.01 0.023±0.00 1.526±0.71 0.118±0.07 0.118±0.03 0.058±0.03 0.004±0.00 0.175±0.07 0.091±0.03 0.036±0.00 0.046±0.03 0.031±0.00
ENSMUST00000097720 N/A N/A N/A 0.015±0.00 1.399±0.00 N/A N/A 0.076±0.04 0.100±0.00 N/A 0.088±0.00 0.220±0.10 0.076±0.05 0.161±0.00
ENSMUST00000124816 N/A N/A N/A 0.208±0.00 N/A 0.075±0.00 0.185±0.01 N/A N/A N/A 0.103±0.00 N/A N/A 0.036±0.00
ENSMUSG00000080800 ENSMUST00000121041 N/A N/A 0.145±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.871±0.43
ENSMUSG00000081382 ENSMUST00000121555 0.278±0.16 5.171±3.20 4.420±0.34 0.630±0.37 0.680±0.57 0.399±0.20 0.303±0.08 0.474±0.16 0.950±1.12 0.385±0.15 0.148±0.02 0.718±0.48 0.259±0.23 0.201±0.08

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