C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003AD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006413-ENSDARG00000016934 CGP 7955 12:40099735-40236087
GeneTranscriptPositionBiotype
ENSDARG00000006413 (rpl38)
ribosomal protein L38 		ENSDART00000021069 (rpl38-001) 40099735-40105115 protein_coding
ENSDART00000145377 (rpl38-002) 40099759-40104569 protein_coding
ENSDARG00000016934 (ttyh2)
tweety homolog 2 (Drosophila) 		ENSDART00000009172 (ttyh2-201) 40106646-40236087 protein_coding
ENSDART00000081046 (ttyh2-001) 40106346-40216649 retained_intron
ENSDART00000134670 (ttyh2-002) 40106646-40220495 protein_coding
CIL_0003AD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172809-ENSG00000141540 CGP 9606 17:74203582-74262020
GeneTranscriptPositionBiotype
ENSG00000141540 (TTYH2)
tweety family member 2 		ENST00000269346 (TTYH2-001) 74213514-74262020 protein_coding
ENST00000441391 (TTYH2-002) 74247958-74262016 protein_coding
ENST00000526858 (TTYH2-008) 74249957-74260206 nonsense_mediated_decay
ENST00000528128 (TTYH2-005) 74243374-74252288 nonsense_mediated_decay
ENST00000528152 (TTYH2-006) 74249324-74253246 retained_intron
ENST00000529107 (TTYH2-003) 74215616-74260651 protein_coding
ENST00000534039 (TTYH2-007) 74249365-74250730 retained_intron
ENST00000534346 (TTYH2-004) 74240800-74250014 processed_transcript
ENST00000578825 (TTYH2-010) 74222644-74244073 retained_intron
ENSG00000172809 (RPL38)
ribosomal protein L38 		ENST00000311111 (RPL38-001) 74203653-74210655 protein_coding
ENST00000439590 (RPL38-003) 74203582-74209880 protein_coding
ENST00000528433 (RPL38-005) 74203704-74204190 protein_coding
ENST00000529123 (RPL38-004) 74203675-74204593 retained_intron
ENST00000530646 (RPL38-002) 74203662-74206283 retained_intron
ENST00000533498 (RPL38-006) 74203704-74209896 protein_coding
ENST00000534490 (RPL38-007) 74203694-74209461 protein_coding
ENST00000584577 (RPL38-008) 74203693-74209878 protein_coding
ENSG00000264272 (CTD-2514K5.4)
 ENST00000583018 (CTD-2514K5.4-001) 74256896-74262020 antisense
CIL_0003AD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057322-ENSMUSG00000034714 CGP 10090 11:114668524-114720977
GeneTranscriptPositionBiotype
ENSMUSG00000034714 (Ttyh2)
tweety homolog 2 (Drosophila) 		ENSMUST00000045779 (Ttyh2-001) 114675431-114720977 protein_coding
ENSMUST00000141111 (Ttyh2-002) 114675516-114690603 processed_transcript
ENSMUSG00000057322 (Rpl38)
ribosomal protein L38 		ENSMUST00000077915 (Rpl38-002) 114668548-114672331 protein_coding
ENSMUST00000082092 (Rpl38-004) 114668626-114672331 protein_coding
ENSMUST00000106599 (Rpl38-003) 114668609-114672331 protein_coding
ENSMUST00000106602 (Rpl38-001) 114668524-114672331 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AD_0001ENSDARG00000006413ENSDART00000021069ENSDART00000145377ENSDARG00000016934ENSDART00000009172ENSDART00000081046ENSDART00000134670CIL_0003AD_0002ENSG00000141540ENST00000269346ENST00000441391ENST00000526858ENST00000528128ENST00000528152ENST00000529107ENST00000534039ENST00000534346ENST00000578825ENSG00000172809ENST00000311111ENST00000439590ENST00000528433ENST00000529123ENST00000530646ENST00000533498ENST00000534490ENST00000584577ENSG00000264272ENST00000583018CIL_0003AD_0003ENSMUSG00000034714ENSMUST00000045779ENSMUST00000141111ENSMUSG00000057322ENSMUST00000077915ENSMUST00000082092ENSMUST00000106599ENSMUST00000106602
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AD_0001ENSDARG00000006413ENSDART00000021069ENSDART00000145377ENSDARG00000016934ENSDART00000009172ENSDART00000134670CIL_0003AD_0002ENSG00000141540ENST00000269346ENST00000441391ENST00000526858ENST00000528128ENST00000529107ENST00000578825ENSG00000172809ENST00000311111ENST00000439590ENST00000528433ENST00000533498ENST00000584577ENSG00000264272ENST00000583018CIL_0003AD_0003ENSMUSG00000034714ENSMUST00000045779ENSMUST00000141111ENSMUSG00000057322ENSMUST00000077915ENSMUST00000082092ENSMUST00000106602
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006413 ENSDART00000021069 N/A N/A N/A 23.451±22.26 N/A N/A 163.732±225.08 0.470±0.00 185.701±0.00 N/A 295.491±0.00 N/A N/A N/A
ENSDART00000145377 N/A N/A N/A 35.293±28.67 N/A N/A 441.484±286.81 68.024±88.53 41.716±0.00 N/A 82.644±0.00 N/A N/A N/A
ENSDARG00000016934 ENSDART00000009172 N/A N/A N/A 4.859±2.44 N/A N/A 6.701±2.57 0.480±0.00 0.554±0.00 N/A 0.718±0.00 N/A N/A N/A
ENSDART00000081046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134670 N/A N/A N/A N/A N/A N/A 5.373±0.00 1.500±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141540 ENST00000269346 1.024±0.00 2.352±0.00 0.224±0.00 3.253±0.00 1.508±0.00 N/A 0.625±0.00 N/A 0.476±0.00 0.854±0.00 2.163±0.00 3.849±3.23 3.615±1.27 3.950±1.09
ENST00000441391 N/A N/A N/A N/A N/A 0.088±0.00 N/A 0.139±0.00 0.144±0.00 N/A N/A 0.065±0.00 N/A N/A
ENST00000526858 N/A N/A N/A N/A 1.427±0.00 N/A 1.405±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000528128 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.474±0.00 N/A N/A N/A N/A
ENST00000528152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529107 N/A N/A 1.270±0.00 10.642±0.00 N/A 0.162±0.00 0.635±0.00 0.254±0.00 0.457±0.00 1.693±0.00 1.660±0.00 0.841±0.00 N/A N/A
ENST00000534039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578825 N/A N/A N/A N/A N/A N/A N/A 0.838±0.00 N/A N/A N/A N/A N/A 10.286±0.00
ENSG00000172809 ENST00000311111 N/A N/A 9.705±0.00 59.921±0.00 41.803±0.00 29.783±0.00 26.229±0.00 17.246±0.00 36.029±0.00 32.202±0.00 53.415±0.00 70.484±29.56 N/A N/A
ENST00000439590 274.950±0.00 378.217±0.00 16.800±0.00 109.950±0.00 237.389±0.00 218.587±167.96 231.512±0.00 77.528±18.84 106.766±58.16 434.282±0.00 597.231±0.00 730.898±432.34 551.567±258.42 242.958±88.69
ENST00000528433 N/A N/A N/A 280.375±0.00 N/A 374.960±0.00 N/A N/A N/A N/A N/A N/A N/A 429.224±0.00
ENST00000529123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533498 N/A N/A N/A 53.444±0.00 N/A N/A N/A 30.052±0.00 N/A N/A N/A N/A N/A N/A
ENST00000534490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584577 155.375±0.00 179.934±0.00 40.972±0.00 204.650±0.00 118.465±3.37 107.342±5.95 99.922±17.75 84.643±19.22 134.614±28.28 400.175±226.87 397.520±224.20 171.052±89.59 173.094±90.48 64.604±23.45
ENSG00000264272 ENST00000583018 2.376±0.00 5.213±0.00 N/A 64.559±0.00 2.831±0.00 3.710±0.00 10.222±0.00 1.551±0.00 0.456±0.00 4.357±0.00 3.441±0.00 14.359±3.18 6.009±1.45 9.796±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034714 ENSMUST00000045779 21.397±8.37 68.511±12.32 1.846±0.03 7.030±1.56 31.258±10.17 12.671±0.92 2.344±0.23 15.225±2.01 16.427±13.14 8.945±0.44 3.621±0.52 32.521±11.00 2.018±1.29 4.002±1.67
ENSMUST00000141111 N/A 66.021±19.37 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000057322 ENSMUST00000077915 63.728±21.53 11.736±3.85 117.968±1.52 221.519±163.26 48.154±8.25 53.302±12.02 53.318±9.39 94.200±25.65 73.771±73.38 74.181±4.72 47.411±4.84 47.095±23.69 99.364±34.94 70.862±24.80
ENSMUST00000082092 N/A 2.315±0.00 N/A N/A 51.954±0.00 N/A N/A N/A 250.931±50.55 N/A N/A 1860.045±155.23 652.257±267.51 35.492±0.00
ENSMUST00000106599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106602 99.119±22.39 15.771±2.32 N/A 200.311±52.06 59.041±20.70 90.893±16.80 74.625±11.42 141.953±40.92 167.715±137.89 94.570±6.16 214.929±24.63 78.771±85.09 261.396±125.00 141.457±36.19

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