C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166509-ENSG00000186153 CGP 9606 16:78022515-79212667
GeneTranscriptPositionBiotype
ENSG00000166509 (CLEC3A)
C-type lectin domain family 3, member A 		ENST00000299642 (CLEC3A-001) 78022515-78032106 protein_coding
ENST00000565808 (CLEC3A-003) 78029089-78030951 processed_transcript
ENST00000567430 (CLEC3A-002) 78022515-78066761 nonsense_mediated_decay
ENSG00000186153 (WWOX)
WW domain containing oxidoreductase 		ENST00000355860 (WWOX-001) 78099679-78278696 protein_coding
ENST00000402655 (WWOX-003) 78099654-79212667 protein_coding
ENST00000406884 (WWOX-004) 78099654-79212667 protein_coding
ENST00000408984 (WWOX-006) 78099694-78780449 protein_coding
ENST00000539474 (WWOX-016) 78099654-79212667 protein_coding
ENST00000561846 (WWOX-015) 78099735-78281049 processed_transcript
ENST00000562214 (WWOX-008) 78099656-78119076 processed_transcript
ENST00000562639 (WWOX-013) 78130049-78432603 processed_transcript
ENST00000563358 (WWOX-011) 78099786-78278703 processed_transcript
ENST00000565562 (WWOX-010) 78099734-78111992 processed_transcript
ENST00000565791 (WWOX-012) 78145917-78270586 processed_transcript
ENST00000566103 (WWOX-014) 79196359-79212300 processed_transcript
ENST00000566662 (WWOX-009) 78099656-78424956 nonsense_mediated_decay
ENST00000566780 (WWOX-005) 78099413-79212667 protein_coding
ENST00000569332 (WWOX-002) 78099626-79212319 nonsense_mediated_decay
ENST00000569818 (WWOX-007) 78099675-78100199 protein_coding
ENST00000620008 (WWOX-201) 78424871-78432752 protein_coding
ENSG00000243101 (RPS3P7)
ribosomal protein S3 pseudogene 7 		ENST00000488662 (RPS3P7-001) 78825281-78826006 processed_pseudogene
ENSG00000260014 (LSM3P5)
LSM3 pseudogene 5 		ENST00000566307 (LSM3P5-001) 78355529-78355834 processed_pseudogene
ENSG00000260479 (RP11-556H2.3)
 ENST00000563230 (RP11-556H2.3-001) 79090050-79101754 sense_intronic
ENSG00000260511 (RP11-556H2.2)
 ENST00000562685 (RP11-556H2.2-001) 79105957-79110882 sense_intronic
ENSG00000260731 (KRT8P22)
keratin 8 pseudogene 22 		ENST00000562317 (KRT8P22-001) 78048483-78049897 processed_pseudogene
ENSG00000260733 (RP11-264L1.4)
 ENST00000563408 (RP11-264L1.4-001) 78495926-78506568 antisense
ENSG00000260816 (RP11-319G9.3)
 ENST00000568885 (RP11-319G9.3-001) 78895361-78899644 sense_intronic
ENSG00000260969 (RP11-190D6.2)
 ENST00000567099 (RP11-190D6.2-001) 78237362-78241218 antisense
ENSG00000261537 (RP11-319G9.5)
 ENST00000561938 (RP11-319G9.5-001) 78994345-79004730 sense_intronic
ENSG00000261540 (RP11-281J9.2)
 ENST00000563114 (RP11-281J9.2-001) 78014683-78059454 antisense
ENSG00000261776 (RP11-358L22.2)
 ENST00000567157 (RP11-358L22.2-001) 78055824-78056927 processed_pseudogene
ENSG00000261837 (RP11-264L1.3)
 ENST00000568764 (RP11-264L1.3-001) 78534374-78535648 sense_intronic
ENSG00000276007 (RP11-358L22.3)
 ENST00000612986 (RP11-358L22.3-001) 78123243-78124332 sense_intronic
ENSG00000277954 (RP11-679B19.1)
 ENST00000622621 (RP11-679B19.1-001) 79202624-79206739 antisense
ENSG00000279129 (RP11-264L1.2)
 ENST00000624947 (RP11-264L1.2-001) 78550739-78553296 TEC
ENST00000625162 (RP11-264L1.2-201) 78550739-78553290 TEC
ENSG00000279732 (RP11-319G9.4)
 ENST00000625055 (RP11-319G9.4-001) 78981722-78981843 TEC
ENSG00000279887 (RP11-264L1.1)
 ENST00000623121 (RP11-264L1.1-001) 78525189-78526535 TEC
ENSG00000279991 (RP11-190D6.1)
 ENST00000624577 (RP11-190D6.1-001) 78166717-78168514 TEC
ENSG00000280115 (RP11-133M8.3)
 ENST00000625152 (RP11-133M8.3-001) 78872739-78873505 TEC
ENSG00000280190 (RP11-319G9.1)
 ENST00000624371 (RP11-319G9.1-001) 78890231-78892302 TEC
ENSG00000280274 (RP11-556H2.1)
 ENST00000625119 (RP11-556H2.1-001) 79016136-79017429 TEC
CIL_0003OH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000008874-ENSMUSG00000004637 CGP 10090 8:114418086-115352708
GeneTranscriptPositionBiotype
ENSMUSG00000004637 (Wwox)
WW domain-containing oxidoreductase 		ENSMUST00000004756 (Wwox-001) 114439655-115352708 protein_coding
ENSMUST00000109107 (Wwox-002) 114439702-114474529 protein_coding
ENSMUST00000109108 (Wwox-004) 114439695-114875238 protein_coding
ENSMUST00000159870 (Wwox-007) 114712167-115019702 processed_transcript
ENSMUST00000160005 (Wwox-005) 114439702-114453818 processed_transcript
ENSMUST00000160205 (Wwox-008) 114608436-114706324 processed_transcript
ENSMUST00000160862 (Wwox-003) 114439695-114718679 protein_coding
ENSMUST00000161753 (Wwox-009) 114448210-114514288 processed_transcript
ENSMUST00000162052 (Wwox-006) 114712167-115352143 processed_transcript
ENSMUSG00000008874 (Clec3a)
C-type lectin domain family 3, member a 		ENSMUST00000009018 (Clec3a-001) 114418086-114425846 protein_coding
ENSMUSG00000089723 (Gm16117)
predicted gene 16117 		ENSMUST00000160544 (Gm16117-001) 114639546-114642114 antisense
ENSMUSG00000089797 (Gm16118)
predicted gene 16118 		ENSMUST00000161914 (Gm16118-001) 114698439-114708006 antisense
ENSMUSG00000090217 (Gm16116)
predicted gene 16116 		ENSMUST00000159472 (Gm16116-001) 114591303-114594900 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166509 ENST00000299642 N/A N/A N/A 0.032±0.00 0.187±0.00 N/A N/A 0.026±0.00 2.545±0.00 0.381±0.00 N/A N/A 0.017±0.00 0.024±0.00
ENST00000565808 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.247±0.00 N/A 0.157±0.00 N/A N/A
ENST00000567430 0.082±0.00 0.587±0.00 N/A 0.251±0.00 0.194±0.00 0.099±0.00 0.154±0.00 0.215±0.00 0.072±0.00 0.392±0.00 0.238±0.00 0.114±0.00 N/A 0.343±0.00
ENSG00000186153 ENST00000355860 N/A N/A N/A 1.081±0.00 N/A N/A N/A 2.863±0.00 1.738±0.00 1.210±0.00 N/A 1.407±0.00 N/A N/A
ENST00000402655 N/A N/A N/A N/A 0.926±0.00 N/A 0.198±0.00 0.337±0.00 0.681±0.00 N/A 1.828±0.00 1.498±0.57 1.622±0.36 1.921±0.00
ENST00000406884 0.821±0.00 N/A N/A 6.044±0.00 3.890±0.00 1.270±0.00 0.778±0.00 0.711±0.35 2.148±0.00 1.181±0.66 N/A 2.586±0.58 1.535±0.68 1.312±0.00
ENST00000408984 N/A N/A 1.586±0.00 N/A N/A N/A N/A N/A 1.016±0.00 N/A N/A N/A 1.000±0.00 N/A
ENST00000539474 N/A 2.265±0.00 N/A N/A N/A N/A N/A 1.373±0.00 N/A N/A N/A N/A N/A N/A
ENST00000561846 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.320±0.00 N/A N/A N/A N/A
ENST00000562214 N/A N/A N/A 2.346±0.00 3.031±0.00 1.141±0.00 0.878±0.00 N/A 1.173±0.00 N/A 0.820±0.00 1.391±0.00 N/A 5.732±0.00
ENST00000562639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565562 3.468±0.00 3.653±0.00 N/A N/A 1.271±0.00 1.959±1.06 1.669±0.00 N/A N/A N/A 0.494±0.00 N/A N/A 6.279±0.00
ENST00000565791 N/A N/A N/A N/A N/A 0.419±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566103 N/A N/A N/A N/A N/A N/A N/A N/A 1.724±0.00 N/A N/A N/A N/A N/A
ENST00000566662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566780 0.780±0.00 N/A N/A 3.952±0.00 N/A 0.588±0.00 0.536±0.00 2.133±0.00 N/A 1.020±0.00 N/A 2.656±1.46 0.878±0.10 3.231±0.39
ENST00000569332 1.628±0.00 2.013±0.00 N/A 3.036±0.00 2.133±0.00 0.686±0.00 N/A 1.133±0.00 N/A 3.642±0.00 N/A N/A N/A 1.793±0.00
ENST00000569818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.819±0.00 6.825±0.00 21.219±0.00
ENST00000620008 N/A N/A N/A N/A N/A N/A N/A N/A 3.609±0.00 N/A 2.101±0.00 2.523±0.00 3.840±1.08 N/A
ENSG00000243101 ENST00000488662 0.045±0.00 0.096±0.00 N/A 0.213±0.00 0.100±0.00 0.023±0.00 0.252±0.00 N/A 0.110±0.00 N/A 0.042±0.00 0.152±0.06 N/A 0.087±0.02
ENSG00000260014 ENST00000566307 N/A N/A 0.313±0.00 N/A 0.194±0.03 N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 0.452±0.00
ENSG00000260479 ENST00000563230 N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A 0.085±0.00 N/A N/A N/A 0.086±0.02 0.237±0.00
ENSG00000260511 ENST00000562685 N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A 0.248±0.00
ENSG00000260731 ENST00000562317 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 0.061±0.00
ENSG00000260733 ENST00000563408 N/A 0.123±0.00 N/A N/A 0.103±0.00 N/A N/A 0.291±0.13 0.706±0.00 N/A N/A N/A N/A 0.047±0.00
ENSG00000260816 ENST00000568885 0.101±0.00 0.730±0.00 0.709±0.00 0.079±0.03 0.428±0.01 0.205±0.09 0.116±0.07 0.245±0.09 0.386±0.34 0.553±0.44 0.005±0.00 0.200±0.12 0.030±0.02 0.192±0.05
ENSG00000260969 ENST00000567099 N/A N/A 0.189±0.00 N/A N/A N/A N/A 0.073±0.00 0.032±0.00 N/A N/A 1.823±0.00 N/A 1.908±0.00
ENSG00000261537 ENST00000561938 N/A 0.354±0.00 0.282±0.00 0.145±0.10 0.020±0.00 0.652±0.00 0.142±0.00 N/A N/A N/A N/A 0.081±0.02 N/A 0.072±0.00
ENSG00000261540 ENST00000563114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00
ENSG00000261776 ENST00000567157 0.031±0.00 0.165±0.00 N/A 0.018±0.00 0.087±0.00 0.016±0.00 0.031±0.00 0.095±0.06 0.030±0.00 N/A 0.146±0.00 N/A N/A 0.093±0.00
ENSG00000261837 ENST00000568764 0.056±0.00 0.345±0.00 N/A 0.120±0.00 0.350±0.27 0.393±0.00 0.103±0.00 N/A N/A 0.791±0.00 N/A N/A N/A 0.083±0.00
ENSG00000276007 ENST00000612986 0.325±0.00 0.975±0.00 0.374±0.00 1.394±0.35 0.391±0.31 0.598±0.45 0.109±0.07 0.536±0.00 1.000±0.87 0.388±0.13 0.112±0.00 0.846±0.42 0.141±0.11 1.346±0.56
ENSG00000277954 ENST00000622621 0.193±0.00 0.233±0.00 0.061±0.00 0.783±0.14 0.205±0.10 0.211±0.01 0.056±0.03 0.060±0.05 0.243±0.22 0.093±0.05 0.225±0.06 0.356±0.29 0.071±0.01 0.546±0.38
ENSG00000279129 ENST00000624947 N/A N/A 0.469±0.00 N/A 0.276±0.01 0.326±0.00 0.061±0.00 0.182±0.00 0.210±0.00 0.122±0.00 0.025±0.00 0.064±0.04 0.064±0.00 0.102±0.00
ENST00000625162 0.081±0.00 0.282±0.00 0.470±0.00 0.176±0.00 0.265±0.00 0.326±0.00 0.066±0.00 0.158±0.02 0.125±0.08 0.098±0.02 0.051±0.00 0.085±0.05 0.065±0.00 0.135±0.01
ENSG00000279732 ENST00000625055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.535±0.00
ENSG00000279887 ENST00000623121 0.102±0.00 0.647±0.00 0.842±0.00 0.131±0.03 0.259±0.10 0.198±0.07 0.037±0.02 0.038±0.00 0.171±0.13 0.369±0.24 0.009±0.00 0.088±0.04 N/A 0.105±0.03
ENSG00000279991 ENST00000624577 N/A N/A 0.658±0.00 0.133±0.11 0.082±0.00 0.354±0.00 0.094±0.00 0.063±0.03 0.092±0.00 0.267±0.00 N/A 0.005±0.00 0.011±0.00 0.055±0.03
ENSG00000280115 ENST00000625152 N/A 0.015±0.00 0.403±0.00 0.031±0.00 N/A 0.436±0.41 0.146±0.12 N/A N/A 0.588±0.00 0.950±0.00 N/A N/A N/A
ENSG00000280190 ENST00000624371 N/A 0.062±0.00 0.818±0.00 0.071±0.06 0.588±0.55 0.837±0.00 0.128±0.12 0.014±0.00 0.836±0.00 0.397±0.00 0.310±0.00 0.246±0.19 N/A 0.035±0.00
ENSG00000280274 ENST00000625119 0.100±0.00 N/A 0.073±0.00 0.124±0.02 0.212±0.10 0.260±0.00 0.095±0.00 0.108±0.03 0.104±0.03 0.155±0.00 0.011±0.00 0.105±0.06 0.087±0.00 0.285±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004637 ENSMUST00000004756 4.897±1.21 6.061±5.19 3.146±0.05 2.591±0.50 3.734±1.38 3.387±1.43 1.025±0.25 7.261±1.56 1.391±0.33 4.627±1.38 1.196±0.09 6.961±2.38 1.301±0.64 6.228±0.24
ENSMUST00000109107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109108 N/A N/A N/A N/A 1.412±0.00 1.323±0.22 N/A 1.391±0.00 0.722±0.27 N/A N/A 2.471±0.39 0.623±0.07 N/A
ENSMUST00000159870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160005 0.781±0.13 N/A 0.644±0.03 0.673±0.00 0.945±0.32 1.321±0.00 0.461±0.04 N/A 0.511±0.12 1.122±0.21 0.754±0.09 2.087±0.65 0.498±0.22 2.669±0.13
ENSMUST00000160205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160862 1.204±0.03 N/A N/A N/A 1.731±0.75 N/A 0.734±0.30 1.866±0.00 0.940±0.35 1.173±0.00 N/A 2.594±0.23 N/A N/A
ENSMUST00000161753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162052 N/A 14.488±2.42 N/A 10.252±0.00 3.351±0.06 3.667±0.93 N/A 4.225±0.00 N/A N/A N/A 9.221±2.80 4.110±1.21 52.883±0.00
ENSMUSG00000008874 ENSMUST00000009018 N/A N/A N/A N/A N/A N/A 1.026±0.56 N/A N/A N/A 0.199±0.10 N/A 0.054±0.02 0.467±0.11
ENSMUSG00000089723 ENSMUST00000160544 0.288±0.00 N/A 0.156±0.11 N/A N/A N/A N/A N/A N/A N/A 0.194±0.08 N/A N/A N/A
ENSMUSG00000089797 ENSMUST00000161914 0.634±0.18 0.278±0.11 0.751±0.12 0.094±0.00 1.730±1.09 0.393±0.15 0.057±0.00 0.292±0.15 0.083±0.03 1.099±0.30 3.858±0.88 1.327±0.54 0.067±0.03 0.232±0.15
ENSMUSG00000090217 ENSMUST00000159472 0.231±0.08 0.161±0.00 0.355±0.00 N/A 0.346±0.09 0.192±0.00 0.154±0.06 0.108±0.01 0.451±0.23 0.242±0.08 N/A 0.514±0.27 0.171±0.07 0.165±0.06

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