C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003PR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167207-ENSG00000083799 CGP 9606 16:50693603-50801935
GeneTranscriptPositionBiotype
ENSG00000167207 (NOD2)
nucleotide-binding oligomerization domain containing 2 		ENST00000300589 (NOD2-001) 50697139-50733077 protein_coding
ENST00000524712 (NOD2-008) 50712194-50723374 nonsense_mediated_decay
ENST00000526417 (NOD2-003) 50693603-50710951 processed_transcript
ENST00000527052 (NOD2-009) 50712194-50723374 nonsense_mediated_decay
ENST00000527070 (NOD2-002) 50697140-50710791 nonsense_mediated_decay
ENST00000529633 (NOD2-007) 50712194-50723374 nonsense_mediated_decay
ENST00000531674 (NOD2-004) 50693626-50699933 protein_coding
ENST00000532206 (NOD2-005) 50697140-50710791 processed_transcript
ENST00000534057 (NOD2-010) 50712194-50723374 protein_coding
ENST00000534067 (NOD2-006) 50712194-50723374 nonsense_mediated_decay
ENSG00000261644 (RP11-327F22.2)
 ENST00000567728 (RP11-327F22.2-001) 50735713-50740716 antisense
ENSG00000270120 (RP11-327F22.6)
 ENST00000602304 (RP11-327F22.6-001) 50712844-50713589 sense_intronic
CIL_0003PR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055994-ENSMUSG00000036712 CGP 10090 8:88647315-88751945
GeneTranscriptPositionBiotype
ENSMUSG00000036712 (Cyld)
cylindromatosis (turban tumor syndrome) 		ENSMUST00000043526 (Cyld-201) 88697028-88751945 protein_coding
ENSMUST00000098519 (Cyld-202) 88705222-88751945 protein_coding
ENSMUST00000109626 (Cyld-203) 88705222-88751945 protein_coding
ENSMUSG00000055994 (Nod2)
nucleotide-binding oligomerization domain containing 2 		ENSMUST00000054324 (Nod2-003) 88647315-88688474 protein_coding
ENSMUST00000109634 (Nod2-002) 88651341-88688474 protein_coding
ENSMUST00000118370 (Nod2-001) 88647315-88688474 protein_coding
ENSMUST00000124091 (Nod2-004) 88647384-88665700 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PR_0001ENSG00000167207ENST00000300589ENST00000524712ENST00000526417ENST00000527052ENST00000527070ENST00000529633ENST00000531674ENST00000532206ENST00000534057ENST00000534067ENSG00000261644ENST00000567728ENSG00000270120ENST00000602304CIL_0003PR_0002ENSMUSG00000036712ENSMUST00000043526ENSMUST00000098519ENSMUST00000109626ENSMUSG00000055994ENSMUST00000054324ENSMUST00000109634ENSMUST00000118370ENSMUST00000124091
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PR_0001ENSG00000167207ENST00000300589ENST00000524712ENST00000527070ENST00000529633ENST00000531674ENST00000534067ENSG00000261644ENST00000567728ENSG00000270120ENST00000602304CIL_0003PR_0002ENSMUSG00000036712ENSMUST00000043526ENSMUST00000098519ENSMUST00000109626ENSMUSG00000055994ENSMUST00000054324ENSMUST00000109634ENSMUST00000118370ENSMUST00000124091
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167207 ENST00000300589 N/A 0.181±0.00 0.106±0.00 0.011±0.00 N/A N/A 0.018±0.00 0.015±0.00 0.080±0.00 0.187±0.00 N/A 0.311±0.05 N/A N/A
ENST00000524712 N/A N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 N/A N/A N/A N/A N/A
ENST00000526417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 0.221±0.00 N/A N/A
ENST00000529633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.473±0.00 N/A
ENST00000531674 N/A N/A N/A N/A N/A 0.111±0.00 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000532206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534067 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.913±0.00 N/A N/A N/A N/A
ENSG00000261644 ENST00000567728 0.013±0.00 0.720±0.00 N/A 0.072±0.00 0.027±0.00 N/A 0.071±0.00 0.078±0.00 0.052±0.02 0.044±0.00 N/A 0.129±0.00 0.129±0.08 0.201±0.08
ENSG00000270120 ENST00000602304 N/A 0.048±0.00 N/A 0.050±0.00 N/A 0.198±0.00 0.046±0.00 N/A N/A 0.632±0.15 N/A 0.070±0.02 N/A 0.084±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036712 ENSMUST00000043526 1.923±0.32 1.314±0.00 0.520±0.00 N/A N/A 0.471±0.10 0.586±0.00 1.062±0.00 0.491±0.03 N/A N/A N/A 1.069±0.00 0.371±0.17
ENSMUST00000098519 N/A 4.784±0.00 N/A 12.567±0.00 N/A N/A N/A N/A 0.252±0.00 N/A 1.266±0.25 1.643±0.81 N/A N/A
ENSMUST00000109626 1.728±0.45 3.245±1.03 3.043±0.00 7.995±0.00 1.058±0.22 2.118±0.93 1.227±0.00 N/A 1.089±0.50 1.244±0.00 1.867±0.35 2.606±1.92 3.674±2.12 3.234±0.00
ENSMUSG00000055994 ENSMUST00000054324 N/A N/A N/A N/A 0.268±0.00 N/A N/A 0.170±0.11 N/A N/A N/A N/A N/A N/A
ENSMUST00000109634 0.431±0.27 0.217±0.09 N/A 0.259±0.00 0.412±0.15 0.201±0.00 0.193±0.03 0.230±0.10 0.041±0.03 0.516±0.00 N/A 0.252±0.08 0.764±0.11 0.064±0.03
ENSMUST00000118370 0.322±0.11 N/A 0.147±0.02 0.056±0.00 0.454±0.20 0.633±0.16 0.343±0.08 0.248±0.12 0.023±0.01 0.660±0.23 0.243±0.07 0.326±0.16 0.282±0.23 0.093±0.00
ENSMUST00000124091 0.316±0.01 0.380±0.16 0.084±0.00 0.053±0.00 0.720±0.20 0.533±0.19 0.159±0.02 0.294±0.09 0.023±0.01 1.134±0.34 N/A 0.441±0.26 0.091±0.00 0.112±0.04

Loading