C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003U5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000063244-ENSG00000063245 CGP 9606 19:55654146-55709858
GeneTranscriptPositionBiotype
ENSG00000063244 (U2AF2)
U2 small nuclear RNA auxiliary factor 2 		ENST00000308924 (U2AF2-002) 55655065-55674298 protein_coding
ENST00000450554 (U2AF2-001) 55654146-55674715 protein_coding
ENST00000587196 (U2AF2-003) 55655109-55661946 nonsense_mediated_decay
ENST00000587275 (U2AF2-009) 55662519-55664059 retained_intron
ENST00000588850 (U2AF2-010) 55655082-55661317 retained_intron
ENST00000590551 (U2AF2-008) 55662499-55674239 protein_coding
ENST00000592867 (U2AF2-005) 55659208-55660485 retained_intron
ENST00000592874 (U2AF2-007) 55660516-55668865 nonsense_mediated_decay
ENSG00000063245 (EPN1)
epsin 1 		ENST00000085079 (EPN1-003) 55675245-55695766 protein_coding
ENST00000270460 (EPN1-002) 55675226-55709533 protein_coding
ENST00000411543 (EPN1-001) 55676625-55695441 protein_coding
ENST00000586194 (EPN1-005) 55692648-55693387 retained_intron
ENST00000587937 (EPN1-008) 55695885-55697830 processed_transcript
ENST00000589704 (EPN1-007) 55692770-55709858 protein_coding
ENST00000591743 (EPN1-004) 55680676-55689915 processed_transcript
ENSG00000267096 (CTD-2537I9.13)
 ENST00000592252 (CTD-2537I9.13-001) 55670632-55672069 sense_intronic
ENSG00000267117 (AC010525.4)
 ENST00000585559 (AC010525.4-001) 55694118-55694558 antisense
CIL_0003U5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030435-ENSMUSG00000035203 CGP 10090 7:5062143-5098178
GeneTranscriptPositionBiotype
ENSMUSG00000030435 (U2af2)
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 		ENSMUST00000005041 (U2af2-201) 5062143-5079945 protein_coding
ENSMUST00000165399 (U2af2-202) 5067228-5079932 protein_coding
ENSMUSG00000035203 (Epn1)
epsin 1 		ENSMUST00000045277 (Epn1-002) 5080293-5098176 protein_coding
ENSMUST00000098845 (Epn1-001) 5080235-5098178 protein_coding
ENSMUST00000146317 (Epn1-003) 5080240-5089961 protein_coding
ENSMUST00000152083 (Epn1-005) 5083665-5095201 processed_transcript
ENSMUST00000153169 (Epn1-004) 5080268-5083916 protein_coding
ENSMUST00000155436 (Epn1-006) 5089838-5092965 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003U5_0001ENSG00000063244ENST00000308924ENST00000450554ENST00000587196ENST00000587275ENST00000588850ENST00000590551ENST00000592867ENST00000592874ENSG00000063245ENST00000085079ENST00000270460ENST00000411543ENST00000586194ENST00000587937ENST00000589704ENST00000591743ENSG00000267096ENST00000592252ENSG00000267117ENST00000585559CIL_0003U5_0002ENSMUSG00000030435ENSMUST00000005041ENSMUST00000165399ENSMUSG00000035203ENSMUST00000045277ENSMUST00000098845ENSMUST00000146317ENSMUST00000152083ENSMUST00000153169ENSMUST00000155436
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003U5_0001ENSG00000063244ENST00000308924ENST00000450554ENST00000590551ENSG00000063245ENST00000085079ENST00000270460ENST00000411543ENST00000591743ENSG00000267096ENST00000592252ENSG00000267117ENST00000585559CIL_0003U5_0002ENSMUSG00000030435ENSMUST00000005041ENSMUST00000165399ENSMUSG00000035203ENSMUST00000045277ENSMUST00000098845ENSMUST00000146317ENSMUST00000155436
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000063244 ENST00000308924 12.619±0.00 23.232±0.00 N/A 8.734±0.00 7.833±5.68 N/A N/A N/A N/A 1.915±0.00 N/A 6.984±5.65 20.711±2.64 14.843±0.00
ENST00000450554 15.170±0.00 38.944±0.00 3.063±0.00 15.529±9.33 10.765±8.50 17.399±14.93 11.156±10.15 18.484±14.72 12.201±9.25 29.179±28.51 10.847±9.51 43.688±32.74 34.418±0.66 50.754±1.50
ENST00000587196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590551 N/A N/A 1.679±0.00 N/A 7.408±0.00 11.533±5.65 1.229±0.00 11.093±8.17 4.252±0.00 5.459±0.00 5.166±2.12 49.848±51.57 45.797±27.06 88.203±0.00
ENST00000592867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000063245 ENST00000085079 55.287±0.00 62.126±0.00 1.098±0.00 35.737±26.63 29.292±26.30 31.610±28.07 39.671±36.99 27.140±24.24 33.540±32.65 48.839±0.00 42.349±33.21 65.356±37.51 56.919±21.31 52.716±22.09
ENST00000270460 N/A 2.149±0.00 N/A N/A 0.391±0.05 0.456±0.00 0.074±0.00 0.685±0.26 0.111±0.00 0.196±0.00 N/A 0.484±0.32 0.547±0.00 1.525±0.00
ENST00000411543 N/A N/A N/A N/A 1.242±0.00 N/A N/A 2.033±0.00 0.734±0.00 N/A N/A 3.185±0.00 N/A N/A
ENST00000586194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591743 34.940±0.00 N/A N/A N/A 20.984±10.34 12.540±0.00 2.607±0.00 9.597±0.00 N/A 6.407±0.00 4.472±0.00 16.295±12.84 37.904±0.00 48.251±4.87
ENSG00000267096 ENST00000592252 0.160±0.00 2.049±0.00 N/A 0.234±0.14 0.561±0.14 0.162±0.00 0.222±0.09 0.387±0.31 0.136±0.00 0.088±0.00 0.365±0.00 0.335±0.30 0.081±0.02 0.372±0.02
ENSG00000267117 ENST00000585559 0.049±0.00 N/A N/A 0.180±0.00 0.318±0.00 N/A 0.099±0.00 0.053±0.00 0.139±0.00 N/A N/A 0.111±0.02 0.430±0.00 0.448±0.30
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030435 ENSMUST00000005041 32.178±15.43 30.357±7.97 36.356±8.09 77.645±45.29 33.874±10.34 27.113±13.04 13.235±7.42 26.709±14.09 48.158±34.47 46.335±4.22 5.237±0.82 42.255±16.73 61.455±19.35 19.414±7.68
ENSMUST00000165399 N/A 13.080±0.00 N/A 41.666±0.00 18.984±7.01 20.024±0.06 10.164±0.00 15.058±0.42 15.860±7.41 20.655±0.43 N/A 30.033±9.96 39.297±24.14 11.505±2.30
ENSMUSG00000035203 ENSMUST00000045277 7.223±0.00 15.484±0.00 4.887±0.00 45.862±0.00 N/A 13.191±0.00 N/A N/A 5.325±1.23 6.558±0.85 16.590±0.00 40.072±0.00 34.534±24.87 2.543±0.00
ENSMUST00000098845 35.228±5.13 60.513±6.22 31.356±2.34 59.854±18.44 46.819±21.19 95.521±11.40 39.502±7.47 67.449±4.12 46.199±12.93 37.934±7.65 53.266±8.44 32.936±11.64 36.977±19.52 23.181±5.73
ENSMUST00000146317 N/A 160.766±0.00 N/A 150.423±0.00 44.008±22.64 73.993±0.00 31.402±0.00 N/A N/A 35.806±0.00 N/A 62.526±14.98 N/A N/A
ENSMUST00000152083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155436 N/A N/A N/A 312.991±0.00 N/A N/A N/A N/A N/A N/A N/A 100.228±0.00 88.380±0.00 45.264±0.00

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