C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003UU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000019995-ENSG00000175029 CGP 9606 10:124942123-125161170
GeneTranscriptPositionBiotype
ENSG00000019995 (ZRANB1)
zinc finger, RAN-binding domain containing 1 		ENST00000359653 (ZRANB1-001) 124942123-124988189 protein_coding
ENST00000471421 (ZRANB1-002) 124981411-124983496 processed_transcript
ENSG00000175029 (CTBP2)
C-terminal binding protein 2 		ENST00000309035 (CTBP2-006) 124988938-125027890 protein_coding
ENST00000334808 (CTBP2-005) 124989135-125006013 protein_coding
ENST00000337195 (CTBP2-001) 124984317-125160513 protein_coding
ENST00000395705 (CTBP2-015) 124993267-125003000 nonsense_mediated_decay
ENST00000411419 (CTBP2-011) 124989225-125161026 protein_coding
ENST00000460976 (CTBP2-004) 125003338-125160145 processed_transcript
ENST00000467395 (CTBP2-008) 125110997-125159957 processed_transcript
ENST00000476817 (CTBP2-010) 125038997-125161170 processed_transcript
ENST00000486955 (CTBP2-012) 124997792-125003384 retained_intron
ENST00000493552 (CTBP2-009) 125003464-125028028 processed_transcript
ENST00000494626 (CTBP2-002) 124989225-125160499 protein_coding
ENST00000530884 (CTBP2-014) 125039046-125161061 protein_coding
ENST00000530930 (CTBP2-013) 125100587-125138250 processed_transcript
ENST00000531469 (CTBP2-003) 124989225-125158716 protein_coding
ENSG00000226899 (RP11-298J20.3)
 ENST00000449984 (RP11-298J20.3-001) 124945204-124946432 antisense
ENSG00000264572 (MIR4296)
microRNA 4296 		ENST00000581038 (MIR4296-201) 125032783-125032870 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003UU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030967-ENSMUSG00000030970 CGP 10090 7:132931142-133124354
GeneTranscriptPositionBiotype
ENSMUSG00000030967 (Zranb1)
zinc finger, RAN-binding domain containing 1 		ENSMUST00000033265 (Zranb1-201) 132949584-132983996 protein_coding
ENSMUST00000106157 (Zranb1-001) 132931142-132986391 protein_coding
ENSMUST00000153335 (Zranb1-002) 132980859-132982766 retained_intron
ENSMUSG00000030970 (Ctbp2)
C-terminal binding protein 2 		ENSMUST00000033269 (Ctbp2-001) 132987621-133123367 protein_coding
ENSMUST00000155996 (Ctbp2-015) 133025720-133111791 protein_coding
ENSMUST00000163601 (Ctbp2-019) 133014657-133123346 protein_coding
ENSMUST00000164739 (Ctbp2-014) 133014836-133030116 processed_transcript
ENSMUST00000164896 (Ctbp2-007) 133014854-133123770 processed_transcript
ENSMUST00000165457 (Ctbp2-003) 132987563-133015490 nonsense_mediated_decay
ENSMUST00000165534 (Ctbp2-011) 133014467-133123348 processed_transcript
ENSMUST00000166400 (Ctbp2-008) 133014467-133123472 processed_transcript
ENSMUST00000166439 (Ctbp2-002) 132987584-133123166 protein_coding
ENSMUST00000167218 (Ctbp2-010) 133015122-133122615 protein_coding
ENSMUST00000168238 (Ctbp2-017) 133081517-133123184 retained_intron
ENSMUST00000168762 (Ctbp2-006) 133043718-133123856 processed_transcript
ENSMUST00000168958 (Ctbp2-018) 132991727-133023757 protein_coding
ENSMUST00000169570 (Ctbp2-004) 132987578-133015248 protein_coding
ENSMUST00000170459 (Ctbp2-009) 133015164-133123425 protein_coding
ENSMUST00000171022 (Ctbp2-016) 133025721-133123312 protein_coding
ENSMUST00000171727 (Ctbp2-013) 133014731-133112699 processed_transcript
ENSMUST00000171882 (Ctbp2-020) 133025702-133124354 protein_coding
ENSMUST00000171968 (Ctbp2-005) 133025764-133123856 protein_coding
ENSMUST00000172341 (Ctbp2-012) 132995194-133122200 protein_coding
ENSMUSG00000085663 (Gm15718)
predicted gene 15718 		ENSMUST00000131085 (Gm15718-001) 132979582-132983552 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UU_0001ENSG00000019995ENST00000359653ENST00000471421ENSG00000175029ENST00000309035ENST00000334808ENST00000337195ENST00000395705ENST00000411419ENST00000460976ENST00000467395ENST00000476817ENST00000486955ENST00000493552ENST00000494626ENST00000530884ENST00000530930ENST00000531469ENSG00000226899ENST00000449984ENSG00000264572ENST00000581038CIL_0003UU_0002ENSMUSG00000030967ENSMUST00000033265ENSMUST00000106157ENSMUST00000153335ENSMUSG00000030970ENSMUST00000033269ENSMUST00000155996ENSMUST00000163601ENSMUST00000164739ENSMUST00000164896ENSMUST00000165457ENSMUST00000165534ENSMUST00000166400ENSMUST00000166439ENSMUST00000167218ENSMUST00000168238ENSMUST00000168762ENSMUST00000168958ENSMUST00000169570ENSMUST00000170459ENSMUST00000171022ENSMUST00000171727ENSMUST00000171882ENSMUST00000171968ENSMUST00000172341ENSMUSG00000085663ENSMUST00000131085
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UU_0001ENSG00000019995ENST00000359653ENSG00000175029ENST00000309035ENST00000334808ENST00000337195ENST00000494626ENST00000531469ENSG00000226899ENST00000449984ENSG00000264572ENST00000581038CIL_0003UU_0002ENSMUSG00000030967ENSMUST00000033265ENSMUST00000106157ENSMUSG00000030970ENSMUST00000033269ENSMUST00000166439ENSMUSG00000085663ENSMUST00000131085
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000019995 ENST00000359653 N/A 1.994±0.00 1.444±0.00 1.516±0.00 N/A 2.181±0.00 1.306±0.00 2.739±0.00 N/A N/A N/A 4.308±0.71 N/A N/A
ENST00000471421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175029 ENST00000309035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.131±0.00 N/A N/A
ENST00000334808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.191±0.00 N/A
ENST00000337195 N/A 4.265±0.00 N/A 6.043±0.00 4.941±0.00 6.257±4.06 0.615±0.00 6.579±0.00 0.942±0.10 N/A 11.533±0.00 6.073±3.81 5.547±1.37 N/A
ENST00000395705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.277±0.00 N/A N/A
ENST00000530884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531469 N/A N/A 4.063±0.00 N/A 7.057±0.00 5.903±0.00 N/A N/A N/A N/A N/A 25.810±13.40 8.541±2.17 N/A
ENSG00000226899 ENST00000449984 0.053±0.00 0.133±0.00 0.149±0.00 0.144±0.00 0.194±0.08 0.075±0.00 0.122±0.03 0.065±0.00 0.181±0.00 0.216±0.17 0.036±0.00 0.216±0.28 0.029±0.00 0.117±0.02
ENSG00000264572 ENST00000581038 N/A 0.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030967 ENSMUST00000033265 3.745±0.59 N/A N/A 10.298±0.00 3.885±2.27 N/A N/A N/A 4.352±1.15 N/A 5.458±1.02 5.730±2.34 5.857±1.39 24.036±12.27
ENSMUST00000106157 6.426±2.29 7.759±1.04 13.426±0.46 12.991±5.67 4.724±1.05 4.356±1.03 5.346±0.94 5.404±1.04 5.404±2.09 7.027±0.91 14.028±1.15 6.946±2.05 5.801±1.53 5.940±2.99
ENSMUST00000153335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030970 ENSMUST00000033269 12.436±6.23 10.241±1.01 22.181±4.88 28.310±0.73 8.276±0.77 19.342±3.01 4.991±0.27 11.677±0.85 3.315±0.81 11.912±0.00 3.443±0.51 20.373±3.84 15.452±4.63 7.468±1.36
ENSMUST00000155996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166439 24.165±10.67 22.726±3.79 20.084±3.77 24.534±10.76 16.362±4.86 20.415±4.70 5.853±0.55 19.866±4.48 3.964±0.54 32.245±4.84 2.387±0.28 33.554±3.87 22.033±15.49 17.500±6.18
ENSMUST00000167218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085663 ENSMUST00000131085 N/A N/A 0.086±0.03 0.208±0.00 N/A 0.854±0.00 N/A N/A 0.067±0.01 N/A 0.227±0.03 0.494±0.25 0.194±0.16 N/A

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