C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003V2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159128-ENSG00000142188 CGP 9606 21:33402896-33480011
GeneTranscriptPositionBiotype
ENSG00000142188 (TMEM50B)
transmembrane protein 50B 		ENST00000420455 (TMEM50B-002) 33432485-33479943 nonsense_mediated_decay
ENST00000432504 (TMEM50B-005) 33465378-33479289 protein_coding
ENST00000441128 (TMEM50B-011) 33450521-33468926 nonsense_mediated_decay
ENST00000442441 (TMEM50B-004) 33450547-33479936 nonsense_mediated_decay
ENST00000459909 (TMEM50B-003) 33468420-33479948 retained_intron
ENST00000468874 (TMEM50B-008) 33436884-33449189 processed_transcript
ENST00000470682 (TMEM50B-007) 33432798-33449410 processed_transcript
ENST00000474272 (TMEM50B-006) 33465018-33467135 retained_intron
ENST00000484377 (TMEM50B-009) 33432485-33448964 processed_transcript
ENST00000542230 (TMEM50B-001) 33449135-33480011 protein_coding
ENSG00000159128 (IFNGR2)
interferon gamma receptor 2 (interferon gamma transducer 1) 		ENST00000290219 (IFNGR2-001) 33402896-33437521 protein_coding
ENST00000381995 (IFNGR2-002) 33403432-33437521 protein_coding
ENST00000405436 (IFNGR2-007) 33403466-33437502 protein_coding
ENST00000421802 (IFNGR2-005) 33432319-33479348 protein_coding
ENST00000439213 (IFNGR2-003) 33403427-33432216 nonsense_mediated_decay
ENST00000545369 (IFNGR2-004) 33403441-33436944 nonsense_mediated_decay
CIL_0003V2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022965-ENSMUSG00000022964 CGP 10090 16:91547072-91597800
GeneTranscriptPositionBiotype
ENSMUSG00000022964 (Tmem50b)
transmembrane protein 50B 		ENSMUST00000023686 (Tmem50b-001) 91574503-91597800 protein_coding
ENSMUST00000133180 (Tmem50b-003) 91575758-91597664 nonsense_mediated_decay
ENSMUST00000141885 (Tmem50b-002) 91580202-91597800 nonsense_mediated_decay
ENSMUSG00000022965 (Ifngr2)
interferon gamma receptor 2 		ENSMUST00000023687 (Ifngr2-001) 91547072-91565169 protein_coding
ENSMUST00000127644 (Ifngr2-003) 91547147-91560649 nonsense_mediated_decay
ENSMUST00000130404 (Ifngr2-002) 91561323-91565169 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003V2_0001ENSG00000142188ENST00000420455ENST00000432504ENST00000441128ENST00000442441ENST00000459909ENST00000468874ENST00000470682ENST00000474272ENST00000484377ENST00000542230ENSG00000159128ENST00000290219ENST00000381995ENST00000405436ENST00000421802ENST00000439213ENST00000545369CIL_0003V2_0002ENSMUSG00000022964ENSMUST00000023686ENSMUST00000133180ENSMUST00000141885ENSMUSG00000022965ENSMUST00000023687ENSMUST00000127644ENSMUST00000130404
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003V2_0001ENSG00000142188ENST00000420455ENST00000442441ENST00000542230ENSG00000159128ENST00000290219ENST00000381995ENST00000405436ENST00000545369CIL_0003V2_0002ENSMUSG00000022964ENSMUST00000023686ENSMUST00000133180ENSMUSG00000022965ENSMUST00000023687ENSMUST00000127644ENSMUST00000130404
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142188 ENST00000420455 N/A N/A N/A N/A N/A N/A N/A 1.329±0.00 N/A N/A N/A 5.462±0.10 N/A N/A
ENST00000432504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.949±0.00 10.790±0.00 29.098±0.00
ENST00000459909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542230 14.217±0.00 9.603±0.00 3.256±0.00 8.324±0.54 10.058±2.65 9.865±4.82 6.884±3.99 15.150±13.05 7.018±1.11 8.823±5.49 6.670±3.86 13.218±4.35 7.830±2.45 12.886±5.79
ENSG00000159128 ENST00000290219 N/A N/A N/A N/A 5.424±0.00 N/A N/A 2.110±0.00 N/A N/A N/A 13.480±0.00 12.901±0.00 N/A
ENST00000381995 N/A N/A N/A 6.756±0.00 N/A N/A 2.960±0.00 N/A N/A N/A 4.502±0.00 N/A N/A N/A
ENST00000405436 47.039±0.00 45.391±0.00 2.362±0.00 20.244±0.00 26.669±0.00 30.156±0.00 13.514±0.00 35.555±0.00 12.967±7.02 29.085±23.38 5.870±0.00 31.308±18.30 51.781±10.83 26.231±4.07
ENST00000421802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545369 N/A N/A 8.855±0.00 12.613±0.00 19.708±0.00 19.208±0.00 2.607±0.00 6.999±0.00 8.581±0.00 8.604±0.00 10.406±0.00 29.781±0.00 23.793±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022964 ENSMUST00000023686 30.671±4.24 26.446±3.71 36.184±3.75 17.189±4.86 21.106±5.28 30.858±3.74 27.398±5.55 18.392±2.67 3.271±0.94 69.041±1.43 5.647±0.64 18.102±3.88 3.999±1.77 14.719±6.01
ENSMUST00000133180 N/A N/A N/A 16.598±0.00 N/A N/A N/A N/A N/A N/A N/A 13.914±0.00 3.065±1.28 6.162±0.00
ENSMUST00000141885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022965 ENSMUST00000023687 15.541±2.73 34.307±10.45 12.286±0.63 8.273±3.32 29.928±9.09 74.311±8.90 41.435±6.66 8.817±1.38 4.823±1.63 26.999±5.64 5.954±3.75 32.613±13.31 3.287±1.24 3.450±1.26
ENSMUST00000127644 N/A N/A N/A 16.914±0.00 N/A N/A N/A N/A N/A N/A N/A 26.247±3.57 7.858±0.70 N/A
ENSMUST00000130404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.431±0.88

Loading