C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003Y7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000071051-ENSG00000119147 CGP 9606 2:105744897-106078159
GeneTranscriptPositionBiotype
ENSG00000071051 (NCK2)
NCK adaptor protein 2 		ENST00000233154 (NCK2-001) 105744897-105894274 protein_coding
ENST00000393348 (NCK2-004) 105745731-105881534 protein_coding
ENST00000393349 (NCK2-002) 105851782-105894272 protein_coding
ENST00000425756 (NCK2-003) 105851748-105881432 protein_coding
ENST00000451463 (NCK2-201) 105745063-105894274 protein_coding
ENST00000522586 (NCK2-005) 105816558-105893176 protein_coding
ENSG00000119147 (C2orf40)
chromosome 2 open reading frame 40 		ENST00000238044 (C2orf40-001) 106065656-106078159 protein_coding
ENST00000409944 (C2orf40-002) 106063294-106078155 protein_coding
ENST00000437659 (C2orf40-005) 106065800-106077900 protein_coding
ENST00000479337 (C2orf40-003) 106073818-106078155 retained_intron
ENST00000489174 (C2orf40-006) 106063257-106074239 processed_transcript
ENST00000493478 (C2orf40-004) 106063246-106072401 processed_transcript
ENSG00000234162 (AC009505.4)
 ENST00000413151 (AC009505.4-001) 105959084-105962006 lincRNA
ENST00000423727 (AC009505.4-002) 105959187-105960309 lincRNA
CIL_0003Y7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066877-ENSMUSG00000026051 CGP 10090 1:43444579-43742578
GeneTranscriptPositionBiotype
ENSMUSG00000026051 (1500015O10Rik)
RIKEN cDNA 1500015O10 gene 		ENSMUST00000027217 (1500015O10Rik-001) 43730602-43742578 protein_coding
ENSMUSG00000066877 (Nck2)
non-catalytic region of tyrosine kinase adaptor protein 2 		ENSMUST00000086421 (Nck2-001) 43445751-43570515 protein_coding
ENSMUST00000114744 (Nck2-005) 43533569-43569342 protein_coding
ENSMUST00000124817 (Nck2-004) 43457273-43462222 processed_transcript
ENSMUST00000136648 (Nck2-003) 43445751-43462194 processed_transcript
ENSMUST00000187435 (Nck2-007) 43444579-43533632 protein_coding
ENSMUSG00000100764 (RP23-103C13.1)
predicted gene 29155 		ENSMUST00000185910 (RP23-103C13.1-002) 43743584-43743852 antisense
ENSMUST00000186289 (RP23-103C13.1-001) 43741961-43743895 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y7_0001ENSG00000071051ENST00000233154ENST00000393348ENST00000393349ENST00000425756ENST00000451463ENST00000522586ENSG00000119147ENST00000238044ENST00000409944ENST00000437659ENST00000479337ENST00000489174ENST00000493478ENSG00000234162ENST00000413151ENST00000423727CIL_0003Y7_0002ENSMUSG00000026051ENSMUST00000027217ENSMUSG00000066877ENSMUST00000086421ENSMUST00000114744ENSMUST00000124817ENSMUST00000136648ENSMUST00000187435ENSMUSG00000100764ENSMUST00000185910ENSMUST00000186289
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003Y7_0001ENSG00000071051ENST00000233154ENST00000393349ENST00000451463ENSG00000119147ENST00000238044ENST00000409944ENST00000437659ENST00000479337ENST00000489174ENSG00000234162ENST00000413151CIL_0003Y7_0002ENSMUSG00000026051ENSMUST00000027217ENSMUSG00000066877ENSMUST00000086421ENSMUST00000187435ENSMUSG00000100764ENSMUST00000185910ENSMUST00000186289
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071051 ENST00000233154 11.057±0.00 8.834±0.00 1.908±0.00 9.078±0.00 4.927±2.97 5.399±4.34 7.358±6.31 7.590±7.25 2.630±0.30 10.669±8.17 6.268±5.04 15.967±9.08 22.589±6.83 12.029±3.24
ENST00000393348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393349 6.624±0.00 10.979±0.00 0.588±0.00 3.624±0.78 7.350±0.00 11.367±0.00 0.315±0.00 N/A 1.035±0.00 9.495±0.00 N/A 12.586±0.00 6.170±0.00 6.751±0.00
ENST00000425756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451463 N/A N/A N/A 3.694±0.00 1.061±0.00 N/A N/A N/A N/A N/A 1.866±0.00 2.577±0.00 N/A N/A
ENST00000522586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119147 ENST00000238044 8.448±0.00 6.997±0.00 1.426±0.00 4.989±3.88 13.500±0.00 8.740±8.34 1.858±1.46 20.368±0.00 2.961±2.85 18.101±16.98 5.114±0.00 6.642±5.06 11.551±1.84 18.918±0.00
ENST00000409944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.600±3.39
ENST00000437659 N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A N/A N/A 6.432±0.00 N/A
ENST00000479337 N/A 2.173±0.00 N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A N/A 1.866±1.77 N/A N/A
ENST00000489174 N/A N/A N/A N/A N/A N/A N/A 1.139±0.00 N/A N/A N/A N/A N/A 7.350±0.06
ENST00000493478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234162 ENST00000413151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.23
ENST00000423727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026051 ENSMUST00000027217 0.855±0.25 22.443±1.85 1.811±0.34 4.643±1.14 0.921±0.40 0.244±0.08 1.299±0.55 0.574±0.25 0.211±0.11 0.544±0.13 1.003±0.41 24.338±11.93 0.830±0.73 0.377±0.21
ENSMUSG00000066877 ENSMUST00000086421 17.696±4.42 17.326±3.26 14.681±0.86 14.955±9.95 19.884±11.18 32.050±2.94 5.390±0.93 10.506±1.09 4.737±3.44 22.870±2.37 6.455±0.86 22.799±7.53 10.159±3.71 8.392±5.12
ENSMUST00000114744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187435 N/A N/A N/A N/A 12.215±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100764 ENSMUST00000185910 N/A N/A 1.306±0.00 0.103±0.00 N/A N/A N/A N/A 0.192±0.01 N/A 0.421±0.05 0.711±0.57 0.265±0.16 1.142±0.00
ENSMUST00000186289 N/A N/A N/A N/A 2.821±0.00 N/A 0.902±0.01 N/A 0.641±0.36 N/A 0.635±0.00 4.424±0.00 0.905±0.00 1.426±0.64

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