C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00043J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000099866-ENSG00000141933 CGP 9606 19:489176-519654
GeneTranscriptPositionBiotype
ENSG00000099866 (MADCAM1)
mucosal vascular addressin cell adhesion molecule 1 		ENST00000215637 (MADCAM1-002) 496494-505343 protein_coding
ENST00000346144 (MADCAM1-001) 496454-505340 protein_coding
ENST00000382683 (MADCAM1-003) 496500-504965 protein_coding
ENST00000587541 (MADCAM1-004) 489176-505343 protein_coding
ENST00000613880 (MADCAM1-201) 496454-505207 protein_coding
ENST00000617201 (MADCAM1-202) 496454-505207 protein_coding
ENST00000619333 (MADCAM1-203) 496454-505207 protein_coding
ENST00000621286 (MADCAM1-204) 496500-504965 protein_coding
ENST00000622449 (MADCAM1-005) 497818-498727 retained_intron
ENST00000622462 (MADCAM1-205) 496454-505207 protein_coding
ENSG00000141933 (TPGS1)
tubulin polyglutamylase complex subunit 1 		ENST00000359315 (TPGS1-001) 507299-519654 protein_coding
ENST00000588278 (TPGS1-002) 507500-510372 retained_intron
ENSG00000266933 (AC005775.2)
 ENST00000592413 (AC005775.2-001) 490046-507833 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00043J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020310-ENSMUSG00000020308 CGP 10090 10:79664574-79676126
GeneTranscriptPositionBiotype
ENSMUSG00000020308 (Tpgs1)
tubulin polyglutamylase complex subunit 1 		ENSMUST00000020552 (Tpgs1-201) 79669410-79676126 protein_coding
ENSMUSG00000020310 (Madcam1)
mucosal vascular addressin cell adhesion molecule 1 		ENSMUST00000020554 (Madcam1-201) 79664574-79668536 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043J_0001ENSG00000099866ENST00000215637ENST00000346144ENST00000382683ENST00000587541ENST00000613880ENST00000617201ENST00000619333ENST00000621286ENST00000622449ENST00000622462ENSG00000141933ENST00000359315ENST00000588278ENSG00000266933ENST00000592413CIL_00043J_0002ENSMUSG00000020308ENSMUST00000020552ENSMUSG00000020310ENSMUST00000020554
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043J_0001ENSG00000099866ENST00000215637ENST00000346144ENST00000587541ENST00000613880ENST00000621286ENST00000622449ENST00000622462ENSG00000141933ENST00000359315ENST00000588278ENSG00000266933ENST00000592413CIL_00043J_0002ENSMUSG00000020308ENSMUST00000020552ENSMUSG00000020310ENSMUST00000020554
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099866 ENST00000215637 N/A N/A N/A N/A N/A 0.897±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000346144 N/A 0.303±0.00 N/A N/A N/A N/A N/A 0.105±0.00 0.219±0.00 0.528±0.00 N/A 0.081±0.00 0.072±0.00 N/A
ENST00000382683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587541 0.166±0.00 0.056±0.00 N/A 0.956±0.36 0.402±0.00 0.282±0.00 N/A N/A N/A N/A N/A 0.198±0.00 0.137±0.04 0.566±0.01
ENST00000613880 0.045±0.00 N/A N/A N/A 0.064±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000617201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621286 N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A N/A N/A N/A N/A N/A 0.222±0.00
ENST00000622449 N/A N/A N/A 1.085±0.00 N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000622462 N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A
ENSG00000141933 ENST00000359315 8.888±0.00 11.517±0.00 0.957±0.00 3.780±3.13 10.637±0.00 3.558±3.04 2.832±2.73 13.418±0.00 5.182±4.66 4.861±4.10 5.772±0.00 5.862±5.26 7.415±3.27 3.730±1.96
ENST00000588278 N/A 0.978±0.00 0.056±0.00 0.269±0.15 0.341±0.04 0.109±0.00 0.197±0.09 0.165±0.00 0.141±0.00 0.256±0.00 N/A 0.376±0.06 0.159±0.00 0.535±0.21
ENSG00000266933 ENST00000592413 N/A N/A N/A 0.900±0.00 N/A N/A N/A 0.130±0.00 N/A 0.831±0.00 N/A N/A 0.596±0.00 1.511±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020308 ENSMUST00000020552 26.194±1.39 52.783±6.78 16.196±2.25 24.493±2.83 28.847±13.36 36.018±4.11 11.640±3.19 27.054±5.11 17.329±4.07 30.283±1.82 11.298±1.41 40.299±19.62 14.382±5.75 14.758±5.16
ENSMUSG00000020310 ENSMUST00000020554 0.125±0.02 0.091±0.04 0.006±0.00 0.217±0.02 1.290±0.76 1.151±0.80 N/A 0.102±0.07 0.094±0.07 0.034±0.02 0.145±0.12 0.138±0.08 0.419±0.52 0.194±0.02

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