C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00043N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141867-ENSG00000105127 CGP 9606 19:15235519-15379798
GeneTranscriptPositionBiotype
ENSG00000105127 (AKAP8)
A kinase (PRKA) anchor protein 8 		ENST00000269701 (AKAP8-004) 15353385-15379792 protein_coding
ENST00000537303 (AKAP8-003) 15361473-15379781 retained_intron
ENST00000595416 (AKAP8-006) 15373717-15379161 retained_intron
ENST00000598597 (AKAP8-001) 15353521-15373151 nonsense_mediated_decay
ENST00000599883 (AKAP8-005) 15370145-15379798 nonsense_mediated_decay
ENSG00000141867 (BRD4)
bromodomain containing 4 		ENST00000263377 (BRD4-001) 15235519-15280451 protein_coding
ENST00000360016 (BRD4-003) 15252992-15332545 protein_coding
ENST00000371835 (BRD4-002) 15247047-15280451 protein_coding
ENST00000594066 (BRD4-011) 15244523-15246618 retained_intron
ENST00000594841 (BRD4-004) 15256099-15331906 protein_coding
ENST00000594842 (BRD4-009) 15256208-15257315 retained_intron
ENST00000595926 (BRD4-010) 15253751-15255366 retained_intron
ENST00000597315 (BRD4-005) 15265627-15332443 nonsense_mediated_decay
ENST00000601071 (BRD4-006) 15267514-15272981 processed_transcript
ENST00000601941 (BRD4-008) 15269013-15331907 protein_coding
ENST00000602230 (BRD4-007) 15256135-15264400 processed_transcript
ENSG00000270802 (AC005776.1)
 ENST00000603164 (AC005776.1-001) 15338948-15339237 processed_pseudogene
ENSG00000273218 (LLNLR-246C6.1)
 ENST00000609708 (LLNLR-246C6.1-001) 15346068-15348417 lincRNA
CIL_00043N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024002-ENSMUSG00000024045 CGP 10090 17:32196274-32321153
GeneTranscriptPositionBiotype
ENSMUSG00000024002 (Brd4)
bromodomain containing 4 		ENSMUST00000003726 (Brd4-201) 32196276-32284097 protein_coding
ENSMUST00000114475 (Brd4-202) 32206679-32284123 protein_coding
ENSMUST00000119123 (Brd4-004) 32196274-32284097 protein_coding
ENSMUST00000120276 (Brd4-005) 32204910-32284109 protein_coding
ENSMUST00000121285 (Brd4-003) 32196274-32284109 protein_coding
ENSMUST00000125899 (Brd4-002) 32213645-32284677 nonsense_mediated_decay
ENSMUST00000127893 (Brd4-001) 32213610-32284722 protein_coding
ENSMUSG00000024045 (Akap8)
A kinase (PRKA) anchor protein 8 		ENSMUST00000002699 (Akap8-201) 32303676-32321153 protein_coding
ENSMUSG00000097217 (Gm26549)
predicted gene, 26549 		ENSMUST00000181112 (Gm26549-201) 32284787-32298689 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043N_0001ENSG00000105127ENST00000269701ENST00000537303ENST00000595416ENST00000598597ENST00000599883ENSG00000141867ENST00000263377ENST00000360016ENST00000371835ENST00000594066ENST00000594841ENST00000594842ENST00000595926ENST00000597315ENST00000601071ENST00000601941ENST00000602230ENSG00000270802ENST00000603164ENSG00000273218ENST00000609708CIL_00043N_0002ENSMUSG00000024002ENSMUST00000003726ENSMUST00000114475ENSMUST00000119123ENSMUST00000120276ENSMUST00000121285ENSMUST00000125899ENSMUST00000127893ENSMUSG00000024045ENSMUST00000002699ENSMUSG00000097217ENSMUST00000181112
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043N_0001ENSG00000105127ENST00000269701ENST00000598597ENSG00000141867ENST00000263377ENST00000360016ENST00000371835ENST00000594841ENST00000597315ENST00000601071ENST00000601941ENSG00000270802ENST00000603164ENSG00000273218ENST00000609708CIL_00043N_0002ENSMUSG00000024002ENSMUST00000003726ENSMUST00000114475ENSMUST00000119123ENSMUST00000120276ENSMUST00000121285ENSMUST00000127893ENSMUSG00000024045ENSMUST00000002699ENSMUSG00000097217ENSMUST00000181112
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105127 ENST00000269701 7.431±0.00 14.650±0.00 1.578±0.00 4.565±3.60 6.729±0.00 2.498±0.00 3.216±1.91 3.754±2.40 1.952±0.53 3.494±1.48 8.062±0.00 4.909±1.40 4.342±0.09 6.527±0.00
ENST00000537303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598597 3.497±0.00 N/A N/A N/A 2.130±0.00 3.951±0.00 N/A 4.549±0.00 1.785±0.17 4.283±2.95 6.664±0.00 4.725±1.21 2.381±0.00 5.606±0.00
ENST00000599883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141867 ENST00000263377 N/A 6.727±0.00 N/A 0.769±0.00 N/A 0.470±0.00 N/A 0.766±0.00 N/A 0.390±0.00 N/A 0.545±0.00 10.887±5.83 10.163±0.00
ENST00000360016 N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000371835 N/A N/A N/A N/A 0.748±0.00 0.945±0.00 N/A 1.131±0.00 2.970±2.45 N/A 0.693±0.00 7.271±6.27 12.385±0.00 N/A
ENST00000594066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594841 N/A N/A 2.102±0.00 1.065±0.00 2.093±0.00 N/A 0.706±0.00 0.938±0.00 N/A N/A N/A N/A N/A N/A
ENST00000594842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597315 N/A N/A N/A N/A N/A N/A 0.667±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000601071 N/A N/A N/A N/A N/A N/A N/A 5.981±0.00 N/A N/A N/A N/A N/A N/A
ENST00000601941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.074±0.00 N/A N/A N/A
ENST00000602230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270802 ENST00000603164 0.130±0.00 0.222±0.00 N/A 0.631±0.29 0.085±0.00 0.080±0.00 N/A 0.688±0.00 N/A 0.040±0.00 0.079±0.00 0.321±0.07 0.134±0.00 0.451±0.00
ENSG00000273218 ENST00000609708 0.426±0.00 2.022±0.00 N/A 0.352±0.28 0.710±0.14 0.307±0.23 0.241±0.05 0.503±0.07 0.203±0.07 0.269±0.00 0.124±0.08 0.546±0.31 0.733±0.63 1.186±0.54
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024002 ENSMUST00000003726 2.355±0.00 1.502±0.11 N/A N/A 2.120±0.80 3.998±1.38 0.795±0.16 1.663±0.41 1.736±0.53 2.457±0.72 N/A 4.426±1.93 N/A 0.794±0.16
ENSMUST00000114475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.705±0.00
ENSMUST00000119123 1.564±0.00 5.366±3.38 N/A N/A 2.061±1.38 2.792±1.17 N/A 1.134±0.00 N/A 3.528±0.04 N/A N/A N/A N/A
ENSMUST00000120276 2.138±0.48 N/A N/A N/A 1.415±0.00 N/A 1.130±0.16 2.124±0.00 1.728±0.62 N/A N/A N/A 4.897±2.09 0.955±0.07
ENSMUST00000121285 2.812±0.76 1.276±0.00 6.347±4.57 12.778±7.31 3.013±1.08 5.055±0.00 1.820±0.40 3.545±1.46 4.138±2.83 3.757±1.33 2.943±0.77 10.541±6.45 15.993±9.05 1.958±0.80
ENSMUST00000125899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127893 N/A N/A N/A N/A N/A 6.648±1.66 N/A N/A N/A N/A N/A 7.306±1.48 N/A N/A
ENSMUSG00000024045 ENSMUST00000002699 6.441±0.00 19.213±0.92 N/A 25.468±12.44 20.569±3.66 8.670±5.80 3.697±1.85 N/A 11.353±7.86 19.027±4.08 4.562±1.81 22.773±7.76 15.226±3.82 13.888±2.30
ENSMUSG00000097217 ENSMUST00000181112 0.336±0.09 0.271±0.03 0.768±0.06 1.086±0.19 0.436±0.20 0.304±0.09 0.133±0.07 0.146±0.06 0.366±0.21 0.517±0.17 0.252±0.11 0.783±0.61 0.739±0.34 0.572±0.13

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