C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000448_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129152-ENSG00000129159 CGP 9606 11:17719568-17783055
GeneTranscriptPositionBiotype
ENSG00000129152 (MYOD1)
myogenic differentiation 1 		ENST00000250003 (MYOD1-001) 17719568-17722131 protein_coding
ENSG00000129159 (KCNC1)
potassium voltage-gated channel, Shaw-related subfamily, member 1 		ENST00000265969 (KCNC1-002) 17734812-17782672 protein_coding
ENST00000379472 (KCNC1-001) 17735973-17777830 protein_coding
ENST00000525802 (KCNC1-004) 17773551-17779700 processed_transcript
ENST00000526029 (KCNC1-003) 17779172-17783055 retained_intron
CIL_000448_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009471-ENSMUSG00000058975 CGP 10090 7:46376474-46438375
GeneTranscriptPositionBiotype
ENSMUSG00000009471 (Myod1)
myogenic differentiation 1 		ENSMUST00000072514 (Myod1-201) 46376474-46379092 protein_coding
ENSMUSG00000058975 (Kcnc1)
potassium voltage gated channel, Shaw-related subfamily, member 1 		ENSMUST00000025202 (Kcnc1-001) 46396497-46433353 protein_coding
ENSMUST00000160234 (Kcnc1-003) 46422680-46427800 processed_transcript
ENSMUST00000160433 (Kcnc1-002) 46397648-46438375 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000448_0001ENSG00000129152ENST00000250003ENSG00000129159ENST00000265969ENST00000379472ENST00000525802ENST00000526029CIL_000448_0002ENSMUSG00000009471ENSMUST00000072514ENSMUSG00000058975ENSMUST00000025202ENSMUST00000160234ENSMUST00000160433
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000448_0001ENSG00000129152ENST00000250003ENSG00000129159ENST00000265969ENST00000379472ENST00000525802ENST00000526029CIL_000448_0002ENSMUSG00000009471ENSMUST00000072514ENSMUSG00000058975ENSMUST00000025202ENSMUST00000160234ENSMUST00000160433
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129152 ENST00000250003 N/A N/A N/A 0.112±0.00 0.304±0.02 N/A 0.112±0.00 N/A N/A N/A 4.661±0.63 N/A 0.423±0.29 0.552±0.20
ENSG00000129159 ENST00000265969 N/A N/A N/A 5.626±0.00 0.037±0.01 0.039±0.00 0.021±0.00 N/A N/A N/A N/A 0.045±0.03 N/A N/A
ENST00000379472 N/A 0.027±0.00 0.069±0.00 2.300±1.72 0.009±0.00 0.060±0.02 0.006±0.00 0.010±0.00 N/A N/A 0.068±0.00 0.029±0.01 0.071±0.02 1.205±0.32
ENST00000525802 N/A N/A N/A N/A 0.026±0.00 0.065±0.00 N/A N/A N/A N/A 0.392±0.00 N/A N/A N/A
ENST00000526029 N/A N/A N/A 3.689±2.35 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A 0.065±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009471 ENSMUST00000072514 0.021±0.00 N/A 0.196±0.05 0.404±0.18 2.566±1.17 0.046±0.02 0.036±0.00 0.076±0.03 0.178±0.35 0.419±0.02 10.295±4.47 N/A 0.056±0.04 0.039±0.03
ENSMUSG00000058975 ENSMUST00000025202 0.066±0.06 0.138±0.03 0.091±0.02 4.988±1.77 0.752±0.37 0.166±0.06 0.028±0.01 0.041±0.03 0.004±0.00 0.133±0.02 9.365±1.39 0.032±0.02 0.031±0.04 0.438±0.19
ENSMUST00000160234 0.063±0.00 N/A N/A N/A N/A N/A 0.117±0.04 N/A 0.025±0.00 N/A N/A N/A 0.231±0.00 7.236±1.22
ENSMUST00000160433 0.009±0.00 0.193±0.08 0.041±0.00 10.949±7.40 0.813±0.37 0.204±0.04 N/A 0.028±0.02 0.009±0.01 0.104±0.00 3.003±0.37 0.053±0.03 0.008±0.00 N/A

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