C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00044V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000096777-ENSDARG00000054201 CGP 7955 12:30447921-30481442
GeneTranscriptPositionBiotype
ENSDARG00000054201 (rnf40)
ring finger protein 40 		ENSDART00000076342 (rnf40-201) 30460710-30480712 protein_coding
ENSDART00000076346 (rnf40-202) 30459047-30473032 protein_coding
ENSDART00000076355 (rnf40-203) 30459047-30481077 protein_coding
ENSDART00000076572 (rnf40-204) 30459047-30481442 protein_coding
ENSDARG00000054208 (phkg2)
phosphorylase kinase, gamma 2 (testis) 		ENSDART00000076362 (phkg2-001) 30437136-30449345 protein_coding
ENSDARG00000096777 (C12H16orf93)
chromosome 16 open reading frame 93 		ENSDART00000152937 (C12H16orf93-001) 30447921-30458595 protein_coding
ENSDART00000153278 (C12H16orf93-002) 30448990-30458580 protein_coding
CIL_00044V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196118-ENSG00000103549 CGP 9606 16:30757423-30776307
GeneTranscriptPositionBiotype
ENSG00000103549 (RNF40)
ring finger protein 40, E3 ubiquitin protein ligase 		ENST00000324685 (RNF40-001) 30761997-30776307 protein_coding
ENST00000357890 (RNF40-009) 30762322-30775215 protein_coding
ENST00000493683 (RNF40-002) 30762336-30776307 retained_intron
ENST00000563683 (RNF40-011) 30762322-30775181 protein_coding
ENST00000563909 (RNF40-012) 30761745-30763450 protein_coding
ENST00000564260 (RNF40-018) 30767677-30768531 retained_intron
ENST00000565931 (RNF40-015) 30762323-30763549 protein_coding
ENST00000565995 (RNF40-010) 30762322-30766244 protein_coding
ENST00000566703 (RNF40-017) 30765001-30766785 retained_intron
ENST00000566811 (RNF40-013) 30762289-30763505 protein_coding
ENST00000567365 (RNF40-019) 30769339-30773982 protein_coding
ENST00000602784 (RNF40-020) 30774070-30775188 nonsense_mediated_decay
ENSG00000156873 (PHKG2)
phosphorylase kinase, gamma 2 (testis) 		ENST00000328273 (PHKG2-004) 30748440-30757331 protein_coding
ENST00000424889 (PHKG2-002) 30748299-30760391 protein_coding
ENST00000561712 (PHKG2-011) 30753232-30755265 protein_coding
ENST00000563588 (PHKG2-001) 30748270-30761176 protein_coding
ENST00000563607 (PHKG2-010) 30748583-30753553 nonsense_mediated_decay
ENST00000563913 (PHKG2-005) 30748443-30757334 retained_intron
ENST00000564838 (PHKG2-003) 30748402-30757365 retained_intron
ENST00000565897 (PHKG2-009) 30748551-30756517 protein_coding
ENST00000565924 (PHKG2-012) 30748293-30756483 protein_coding
ENST00000569684 (PHKG2-013) 30752494-30756429 retained_intron
ENST00000569762 (PHKG2-007) 30748844-30751913 retained_intron
ENSG00000280211 (RP11-2C24.3)
 ENST00000623557 (RP11-2C24.3-001) 30773532-30776033 TEC
CIL_00044V_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057176-ENSMUSG00000030816 CGP 10090 7:127582384-127603605
GeneTranscriptPositionBiotype
ENSMUSG00000030815 (Phkg2)
phosphorylase kinase, gamma 2 (testis) 		ENSMUST00000033086 (Phkg2-001) 127573404-127583305 protein_coding
ENSMUST00000121004 (Phkg2-005) 127573529-127583305 protein_coding
ENSMUST00000129457 (Phkg2-002) 127573340-127578621 retained_intron
ENSMUST00000133621 (Phkg2-008) 127579280-127582419 retained_intron
ENSMUST00000138158 (Phkg2-007) 127573642-127582398 retained_intron
ENSMUST00000146383 (Phkg2-004) 127573404-127582448 nonsense_mediated_decay
ENSMUST00000149853 (Phkg2-009) 127582096-127582686 retained_intron
ENSMUST00000151908 (Phkg2-003) 127573404-127579286 retained_intron
ENSMUST00000154891 (Phkg2-006) 127573404-127583305 nonsense_mediated_decay
ENSMUSG00000030816 (Rnf40)
ring finger protein 40 		ENSMUST00000033088 (Rnf40-201) 127588698-127603605 protein_coding
ENSMUSG00000057176 (Gm166)
predicted gene 166 		ENSMUST00000072155 (Gm166-201) 127582384-127588595 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044V_0001ENSDARG00000054201ENSDART00000076342ENSDART00000076346ENSDART00000076355ENSDART00000076572ENSDARG00000054208ENSDART00000076362ENSDARG00000096777ENSDART00000152937ENSDART00000153278CIL_00044V_0002ENSG00000103549ENST00000324685ENST00000357890ENST00000493683ENST00000563683ENST00000563909ENST00000564260ENST00000565931ENST00000565995ENST00000566703ENST00000566811ENST00000567365ENST00000602784ENSG00000156873ENST00000328273ENST00000424889ENST00000561712ENST00000563588ENST00000563607ENST00000563913ENST00000564838ENST00000565897ENST00000565924ENST00000569684ENST00000569762ENSG00000280211ENST00000623557CIL_00044V_0003ENSMUSG00000030815ENSMUST00000033086ENSMUST00000121004ENSMUST00000129457ENSMUST00000133621ENSMUST00000138158ENSMUST00000146383ENSMUST00000149853ENSMUST00000151908ENSMUST00000154891ENSMUSG00000030816ENSMUST00000033088ENSMUSG00000057176ENSMUST00000072155
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00044V_0001ENSDARG00000054201ENSDART00000076342ENSDART00000076572ENSDARG00000054208ENSDART00000076362ENSDARG00000096777ENSDART00000152937CIL_00044V_0002ENSG00000103549ENST00000324685ENST00000563683ENSG00000156873ENST00000328273ENSG00000280211ENST00000623557CIL_00044V_0003ENSMUSG00000030815ENSMUST00000033086ENSMUST00000121004ENSMUST00000129457ENSMUST00000133621ENSMUST00000138158ENSMUST00000146383ENSMUST00000151908ENSMUSG00000030816ENSMUST00000033088ENSMUSG00000057176ENSMUST00000072155
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054201 ENSDART00000076342 N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A
ENSDART00000076346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000076355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000076572 N/A N/A N/A 20.062±0.58 N/A N/A 7.050±0.05 26.378±2.65 N/A N/A 2.814±0.00 N/A N/A N/A
ENSDARG00000054208 ENSDART00000076362 N/A N/A N/A 3.030±1.91 N/A N/A 1.352±0.41 6.790±0.00 0.935±0.00 N/A 0.979±0.00 N/A N/A N/A
ENSDARG00000096777 ENSDART00000152937 N/A N/A N/A 2.089±0.54 N/A N/A 2.056±1.46 4.649±2.34 0.315±0.00 N/A 0.252±0.00 N/A N/A N/A
ENSDART00000153278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103549 ENST00000324685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.629±0.00 N/A N/A
ENST00000357890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563683 19.580±0.00 13.595±0.00 4.277±0.00 12.544±8.44 7.916±4.10 5.920±1.48 N/A 6.651±3.69 4.613±0.00 7.196±3.16 N/A 18.953±11.00 16.286±3.32 30.763±5.38
ENST00000563909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156873 ENST00000328273 N/A N/A N/A N/A N/A N/A N/A N/A 10.950±0.00 N/A N/A N/A N/A 83.341±16.43
ENST00000424889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280211 ENST00000623557 N/A N/A N/A 4.900±0.00 16.083±0.00 11.089±0.00 N/A 11.870±8.82 10.281±0.00 21.308±0.00 9.204±6.47 29.452±1.77 21.937±1.49 33.621±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030815 ENSMUST00000033086 5.385±1.15 5.233±0.52 8.687±0.74 10.809±2.14 5.406±0.65 5.376±0.47 2.545±0.68 6.153±1.32 5.356±1.41 6.151±0.69 1.900±0.34 4.797±1.12 5.249±1.48 237.998±39.98
ENSMUST00000121004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.975±0.00 N/A N/A 147.235±41.61
ENSMUST00000129457 3.014±0.00 4.233±0.81 N/A N/A 3.352±0.20 4.548±0.96 1.714±0.24 N/A N/A 4.674±0.00 N/A 5.450±1.31 N/A N/A
ENSMUST00000133621 9.098±1.09 N/A 8.295±0.00 N/A 9.400±1.95 N/A N/A N/A 6.686±0.00 N/A 1.692±0.00 10.641±0.93 N/A N/A
ENSMUST00000138158 N/A 5.386±1.38 N/A N/A 4.698±0.46 N/A N/A N/A N/A N/A 1.415±0.00 N/A N/A N/A
ENSMUST00000146383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.701±0.69 13.246±0.00 7.034±0.76 206.511±0.00
ENSMUST00000149853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151908 4.137±1.01 3.645±0.67 4.459±0.02 7.666±1.19 5.567±1.40 4.606±0.67 1.362±0.23 3.763±1.11 3.323±0.61 5.930±0.93 0.772±0.09 5.500±1.17 1.884±0.98 N/A
ENSMUST00000154891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030816 ENSMUST00000033088 14.217±4.59 13.168±3.85 16.226±0.94 26.546±5.30 12.133±4.81 13.431±1.86 7.462±0.32 11.027±2.54 9.788±2.84 15.569±1.33 8.986±0.94 20.091±6.99 23.757±10.32 40.809±10.58
ENSMUSG00000057176 ENSMUST00000072155 3.309±1.03 4.051±1.20 5.586±0.05 7.411±1.10 4.305±1.73 5.547±0.77 3.153±0.80 5.244±1.06 3.962±0.97 9.232±0.58 1.300±0.46 5.459±1.94 3.400±1.14 167.560±81.23

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