C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000070828-ENSDARG00000075743 CGP 7955 6:29100524-29116374
GeneTranscriptPositionBiotype
ENSDARG00000070828 (actl6a)
actin-like 6A 		ENSDART00000104303 (actl6a-001) 29100524-29109500 protein_coding
ENSDART00000130813 (actl6a-201) 29100580-29109494 protein_coding
ENSDART00000141064 (actl6a-002) 29100599-29102797 processed_transcript
ENSDARG00000075743 (mrpl47)
mitochondrial ribosomal protein L47 		ENSDART00000115031 (mrpl47-001) 29111350-29116374 protein_coding
CIL_00049Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136518-ENSG00000136522 CGP 9606 3:179562880-179604654
GeneTranscriptPositionBiotype
ENSG00000136518 (ACTL6A)
actin-like 6A 		ENST00000392662 (ACTL6A-201) 179562920-179588398 protein_coding
ENST00000429709 (ACTL6A-001) 179562880-179588408 protein_coding
ENST00000450518 (ACTL6A-002) 179562886-179588407 protein_coding
ENST00000461125 (ACTL6A-016) 179586488-179588241 retained_intron
ENST00000467383 (ACTL6A-013) 179574353-179576275 retained_intron
ENST00000467615 (ACTL6A-014) 179575010-179581008 processed_transcript
ENST00000468767 (ACTL6A-007) 179562923-179575488 processed_transcript
ENST00000479056 (ACTL6A-015) 179576376-179580955 retained_intron
ENST00000484312 (ACTL6A-018) 179581164-179586708 retained_intron
ENST00000486471 (ACTL6A-012) 179573234-179575210 retained_intron
ENST00000487978 (ACTL6A-011) 179569815-179580701 nonsense_mediated_decay
ENST00000490364 (ACTL6A-009) 179562959-179570241 protein_coding
ENST00000491202 (ACTL6A-006) 179562923-179570391 retained_intron
ENST00000494843 (ACTL6A-008) 179562930-179574563 retained_intron
ENSG00000136522 (MRPL47)
mitochondrial ribosomal protein L47 		ENST00000259038 (MRPL47-002) 179588455-179604640 protein_coding
ENST00000392659 (MRPL47-003) 179588831-179604649 protein_coding
ENST00000476781 (MRPL47-001) 179588285-179604654 protein_coding
ENSG00000272660 (RP11-145M9.6)
 ENST00000610007 (RP11-145M9.6-001) 179584271-179584410 antisense
CIL_00049Q_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027671-ENSMUSG00000037531 CGP 10090 3:32708546-32737147
GeneTranscriptPositionBiotype
ENSMUSG00000027671 (Actl6a)
actin-like 6A 		ENSMUST00000029214 (Actl6a-001) 32708546-32726968 protein_coding
ENSMUST00000126144 (Actl6a-003) 32709164-32718656 protein_coding
ENSMUST00000135400 (Actl6a-004) 32711383-32712170 retained_intron
ENSMUST00000153779 (Actl6a-002) 32718567-32726968 retained_intron
ENSMUSG00000037531 (Mrpl47)
mitochondrial ribosomal protein L47 		ENSMUST00000043966 (Mrpl47-001) 32725397-32737147 protein_coding
ENSMUST00000153564 (Mrpl47-002) 32727575-32732613 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049Q_0001ENSDARG00000070828ENSDART00000104303ENSDART00000130813ENSDART00000141064ENSDARG00000075743ENSDART00000115031CIL_00049Q_0002ENSG00000136518ENST00000392662ENST00000429709ENST00000450518ENST00000461125ENST00000467383ENST00000467615ENST00000468767ENST00000479056ENST00000484312ENST00000486471ENST00000487978ENST00000490364ENST00000491202ENST00000494843ENSG00000136522ENST00000259038ENST00000392659ENST00000476781ENSG00000272660ENST00000610007CIL_00049Q_0003ENSMUSG00000027671ENSMUST00000029214ENSMUST00000126144ENSMUST00000135400ENSMUST00000153779ENSMUSG00000037531ENSMUST00000043966ENSMUST00000153564
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049Q_0001ENSDARG00000070828ENSDART00000104303ENSDART00000130813ENSDARG00000075743ENSDART00000115031CIL_00049Q_0002ENSG00000136518ENST00000392662ENST00000429709ENST00000450518ENST00000490364ENST00000491202ENSG00000136522ENST00000259038ENST00000392659ENST00000476781ENSG00000272660ENST00000610007CIL_00049Q_0003ENSMUSG00000027671ENSMUST00000029214ENSMUST00000126144ENSMUSG00000037531ENSMUST00000043966
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070828 ENSDART00000104303 N/A N/A N/A 2.887±1.32 N/A N/A 8.091±0.00 6.234±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000130813 N/A N/A N/A 8.533±2.11 N/A N/A 16.128±5.63 36.022±20.08 1.570±0.00 N/A 2.395±0.00 N/A N/A N/A
ENSDART00000141064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075743 ENSDART00000115031 N/A N/A N/A 10.927±3.98 N/A N/A 17.915±11.29 14.296±7.96 2.518±0.00 N/A 18.122±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136518 ENST00000392662 N/A 7.072±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429709 N/A N/A 0.989±0.00 N/A 1.506±0.00 6.191±0.00 N/A 1.625±0.00 2.379±0.00 3.176±1.99 2.839±0.00 16.951±1.40 9.680±1.00 12.244±0.00
ENST00000450518 7.139±0.00 3.941±0.00 1.764±0.00 1.919±0.08 5.415±0.10 10.231±0.00 2.585±1.20 8.934±0.00 2.538±1.10 2.441±0.43 1.957±0.07 7.264±0.00 N/A 17.935±0.00
ENST00000461125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490364 N/A N/A N/A N/A N/A N/A N/A 11.079±0.00 N/A N/A N/A N/A N/A N/A
ENST00000491202 N/A N/A 5.673±0.00 N/A 9.200±0.00 10.487±0.00 2.604±0.00 N/A 12.370±0.00 4.497±0.00 N/A 20.904±0.00 N/A N/A
ENST00000494843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136522 ENST00000259038 N/A N/A N/A 4.176±0.00 N/A N/A 3.858±0.00 N/A N/A N/A N/A 20.085±0.00 11.798±0.00 31.986±0.00
ENST00000392659 14.255±0.00 22.215±0.00 N/A 5.833±2.35 17.627±0.00 18.825±0.00 8.731±6.46 14.515±11.67 13.421±0.00 9.460±0.00 9.313±0.00 N/A 10.120±0.00 44.044±0.00
ENST00000476781 6.265±0.00 5.892±0.00 1.527±0.00 5.067±1.07 4.829±1.80 6.635±1.34 4.749±2.30 8.171±4.96 3.407±0.57 2.926±0.24 3.327±0.38 10.169±4.25 7.657±0.38 21.236±7.40
ENSG00000272660 ENST00000610007 0.547±0.00 1.461±0.00 5.289±0.00 N/A 1.138±0.00 N/A N/A 1.184±0.00 0.477±0.00 26.748±26.63 1.639±0.00 8.877±0.00 2.189±0.00 0.247±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027671 ENSMUST00000029214 8.111±1.60 N/A N/A 10.608±0.00 N/A 10.438±0.00 N/A N/A 20.408±8.24 7.958±0.88 N/A 11.175±2.67 17.277±3.54 18.761±4.84
ENSMUST00000126144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.051±0.00 37.729±0.00 49.392±0.00
ENSMUST00000135400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037531 ENSMUST00000043966 N/A N/A 3.924±0.09 4.218±1.39 6.343±0.00 N/A N/A N/A 5.938±1.71 2.754±0.00 N/A 4.389±0.54 5.058±1.28 5.420±1.53
ENSMUST00000153564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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