C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004BV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038938-ENSDARG00000038941 CGP 7955 9:45370917-45556301
GeneTranscriptPositionBiotype
ENSDARG00000038938 (ssfa2)
sperm specific antigen 2 		ENSDART00000056844 (ssfa2-201) 45466749-45486702 protein_coding
ENSDART00000091327 (ssfa2-202) 45423206-45457884 protein_coding
ENSDART00000147990 (ssfa2-002) 45370917-45435794 protein_coding
ENSDART00000148826 (ssfa2-001) 45457577-45486703 protein_coding
ENSDARG00000038941 (ppp1r1c)
protein phosphatase 1, regulatory (inhibitor) subunit 1C 		ENSDART00000056846 (ppp1r1c-001) 45497297-45552410 protein_coding
ENSDART00000149726 (ppp1r1c-002) 45497497-45556301 protein_coding
ENSDART00000150119 (ppp1r1c-003) 45497295-45535752 retained_intron
CIL_0004BV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138434-ENSG00000150722 CGP 9606 2:181891833-182131398
GeneTranscriptPositionBiotype
ENSG00000150722 (PPP1R1C)
protein phosphatase 1, regulatory (inhibitor) subunit 1C 		ENST00000280295 (PPP1R1C-004) 181985877-182130018 protein_coding
ENST00000409137 (PPP1R1C-003) 181985868-182131398 protein_coding
ENST00000409702 (PPP1R1C-005) 181986022-182129538 protein_coding
ENST00000461410 (PPP1R1C-012) 182061463-182064123 retained_intron
ENST00000464264 (PPP1R1C-008) 181954524-182129067 processed_transcript
ENST00000465612 (PPP1R1C-010) 181954559-182117444 processed_transcript
ENST00000475249 (PPP1R1C-002) 181954496-182130166 processed_transcript
ENST00000479855 (PPP1R1C-011) 182030883-182117511 processed_transcript
ENST00000486067 (PPP1R1C-007) 181954492-182117516 processed_transcript
ENST00000490645 (PPP1R1C-009) 181954531-182117685 processed_transcript
ENST00000494189 (PPP1R1C-006) 182103601-182117917 processed_transcript
ENST00000495820 (PPP1R1C-001) 181954241-182117518 processed_transcript
ENSG00000213958 (KRT18P29)
keratin 18 pseudogene 29 		ENST00000397031 (KRT18P29-001) 181961212-181962478 processed_pseudogene
ENSG00000265129 (AC064837.1)
 ENST00000581830 (AC064837.1-201) 182088429-182088616 miRNA
CIL_0004BV_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027007-ENSMUSG00000034683 CGP 10090 2:79635352-79818496
GeneTranscriptPositionBiotype
ENSMUSG00000027007 (Ssfa2)
sperm specific antigen 2 		ENSMUST00000111784 (Ssfa2-004) 79635455-79672966 protein_coding
ENSMUST00000111785 (Ssfa2-001) 79635352-79672966 protein_coding
ENSMUST00000111788 (Ssfa2-003) 79635426-79672966 protein_coding
ENSMUST00000124938 (Ssfa2-005) 79635461-79636434 processed_transcript
ENSMUST00000133266 (Ssfa2-002) 79639182-79672966 processed_transcript
ENSMUSG00000034683 (Ppp1r1c)
protein phosphatase 1, regulatory (inhibitor) subunit 1C 		ENSMUST00000040863 (Ppp1r1c-002) 79707922-79808536 protein_coding
ENSMUST00000090760 (Ppp1r1c-001) 79707780-79810313 protein_coding
ENSMUST00000111780 (Ppp1r1c-005) 79707923-79815593 protein_coding
ENSMUST00000141978 (Ppp1r1c-003) 79708062-79818496 processed_transcript
ENSMUST00000144432 (Ppp1r1c-004) 79786591-79809292 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BV_0001ENSDARG00000038938ENSDART00000056844ENSDART00000091327ENSDART00000147990ENSDART00000148826ENSDARG00000038941ENSDART00000056846ENSDART00000149726ENSDART00000150119CIL_0004BV_0002ENSG00000150722ENST00000280295ENST00000409137ENST00000409702ENST00000461410ENST00000464264ENST00000465612ENST00000475249ENST00000479855ENST00000486067ENST00000490645ENST00000494189ENST00000495820ENSG00000213958ENST00000397031ENSG00000265129ENST00000581830CIL_0004BV_0003ENSMUSG00000027007ENSMUST00000111784ENSMUST00000111785ENSMUST00000111788ENSMUST00000124938ENSMUST00000133266ENSMUSG00000034683ENSMUST00000040863ENSMUST00000090760ENSMUST00000111780ENSMUST00000141978ENSMUST00000144432
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004BV_0001ENSDARG00000038938ENSDART00000056844ENSDART00000091327ENSDART00000148826ENSDARG00000038941ENSDART00000056846ENSDART00000149726ENSDART00000150119CIL_0004BV_0002ENSG00000150722ENST00000280295ENST00000409137ENST00000409702ENST00000464264ENST00000465612ENST00000475249ENST00000479855ENST00000486067ENST00000490645ENST00000494189ENST00000495820ENSG00000213958ENST00000397031ENSG00000265129ENST00000581830CIL_0004BV_0003ENSMUSG00000027007ENSMUST00000111784ENSMUST00000111785ENSMUST00000111788ENSMUST00000133266ENSMUSG00000034683ENSMUST00000040863ENSMUST00000090760ENSMUST00000111780ENSMUST00000141978ENSMUST00000144432
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038938 ENSDART00000056844 N/A N/A N/A 21.435±10.90 N/A N/A 3.465±1.55 12.282±1.17 N/A N/A 0.905±0.00 N/A N/A N/A
ENSDART00000091327 N/A N/A N/A 17.412±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000148826 N/A N/A N/A 13.787±8.55 N/A N/A 2.530±0.90 2.326±0.65 2.449±0.00 N/A 2.300±0.00 N/A N/A N/A
ENSDARG00000038941 ENSDART00000056846 N/A N/A N/A 31.258±6.09 N/A N/A 1.566±0.00 N/A N/A N/A 1.409±0.00 N/A N/A N/A
ENSDART00000149726 N/A N/A N/A 7.639±0.00 N/A N/A 0.357±0.05 N/A N/A N/A 2.611±0.00 N/A N/A N/A
ENSDART00000150119 N/A N/A N/A N/A N/A N/A 0.379±0.16 N/A 0.079±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150722 ENST00000280295 N/A N/A N/A 0.080±0.00 N/A N/A 2.660±1.55 N/A N/A N/A N/A 0.024±0.00 N/A N/A
ENST00000409137 N/A N/A 0.017±0.00 0.141±0.00 N/A N/A 0.902±0.09 N/A N/A 0.014±0.00 N/A N/A 0.030±0.00 N/A
ENST00000409702 N/A N/A N/A 0.623±0.47 N/A 0.045±0.00 1.077±0.00 N/A N/A 0.144±0.05 0.688±0.00 N/A 0.051±0.00 N/A
ENST00000461410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464264 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A
ENST00000465612 0.050±0.00 0.112±0.00 N/A N/A N/A N/A N/A 1.186±0.00 N/A N/A N/A N/A N/A N/A
ENST00000475249 N/A N/A N/A N/A 0.019±0.00 N/A N/A 0.366±0.00 N/A 0.090±0.00 0.138±0.00 N/A N/A N/A
ENST00000479855 N/A 0.207±0.00 N/A N/A 0.275±0.00 0.390±0.00 N/A 0.758±0.00 0.712±0.41 0.403±0.00 N/A 0.161±0.06 0.759±0.15 N/A
ENST00000486067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.142±0.00 5.049±1.50
ENST00000490645 0.054±0.00 N/A N/A N/A N/A N/A N/A 1.359±1.08 1.125±0.00 N/A N/A N/A 0.129±0.07 6.386±0.32
ENST00000494189 N/A N/A N/A 0.248±0.10 N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A 0.087±0.00 N/A
ENST00000495820 0.035±0.00 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A 0.019±0.00 N/A 9.413±0.00
ENSG00000213958 ENST00000397031 N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A
ENSG00000265129 ENST00000581830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.274±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027007 ENSMUST00000111784 N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A 1.994±0.54 4.257±2.60 N/A
ENSMUST00000111785 5.593±1.45 2.540±1.60 10.827±6.49 3.850±3.57 1.840±0.78 12.332±2.11 3.057±0.25 8.653±3.00 2.801±1.37 4.984±1.95 2.620±0.49 3.084±2.32 6.186±3.62 1.648±0.43
ENSMUST00000111788 N/A 5.791±0.55 N/A N/A 1.491±0.88 2.616±0.18 N/A 2.961±0.20 1.453±0.00 2.054±0.14 N/A 1.963±1.26 N/A 0.907±0.31
ENSMUST00000124938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133266 0.504±0.00 N/A N/A N/A 1.513±0.00 N/A 0.581±0.00 N/A 0.921±0.02 N/A 0.537±0.00 5.194±4.43 4.600±3.68 N/A
ENSMUSG00000034683 ENSMUST00000040863 N/A N/A 0.024±0.00 0.298±0.00 N/A N/A 0.065±0.00 N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENSMUST00000090760 N/A N/A N/A 0.137±0.10 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A 0.016±0.00 N/A
ENSMUST00000111780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.02 N/A N/A N/A
ENSMUST00000141978 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A 0.011±0.00 0.003±0.00 N/A N/A
ENSMUST00000144432 0.032±0.00 N/A 0.010±0.00 0.364±0.34 0.035±0.00 0.104±0.00 0.028±0.00 0.033±0.00 N/A N/A 0.084±0.05 0.053±0.00 0.027±0.02 5.847±1.84

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