C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm specific antigen 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133266 Ssfa2-002 ENSMUSG00000027007 10090 + 2:79639182-79672966 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverMuscleOvaryPlacentaENSMUST00000133266
Transcript ID Adipose Breast Heart Liver Muscle Ovary Placenta
ENSMUST00000133266 0.504±0.00 1.513±0.00 0.581±0.00 0.921±0.02 0.537±0.00 5.194±4.43 4.600±3.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Y CIL_00080Y_0002 VISTA 2:79161477-79762272
CIL_0004BY CIL_0004BY_0003 CGP 2:79452521-79672966
CIL_0004BV CIL_0004BV_0003 CGP 2:79635352-79818496

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320370 SSFA2-002 protein_coding Homo_sapiens 0 2601
ENST00000409001 SSFA2-004 protein_coding Homo_sapiens 0 2311
ENST00000409136 SSFA2-009 protein_coding Homo_sapiens 0 2278
ENST00000416081 SSFA2-007 nonsense_mediated_decay Homo_sapiens 0 3315
ENST00000431877 SSFA2-001 protein_coding Homo_sapiens 0 3315
ENST00000440623 SSFA2-006 nonsense_mediated_decay Homo_sapiens 0 1929
ENST00000454579 SSFA2-005 nonsense_mediated_decay Homo_sapiens 0 2261
ENST00000467172 SSFA2-013 processed_transcript Homo_sapiens 0 545
ENST00000470654 SSFA2-015 retained_intron Homo_sapiens 0 710
ENST00000491720 SSFA2-008 retained_intron Homo_sapiens 0 1391
ENST00000495248 SSFA2-014 processed_transcript Homo_sapiens 1.96182e-44 182

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