Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	sperm specific antigen 2
ENSMUST00000111785	Ssfa2-001	ENSMUSG00000027007	10090	+	2:79635352-79672966	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000111785	5.593±1.45	2.540±1.60	10.827±6.49	3.850±3.57	1.840±0.78	12.332±2.11	3.057±0.25	8.653±3.00	2.801±1.37	4.984±1.95	2.620±0.49	3.084±2.32	6.186±3.62	1.648±0.43

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00080Y	CIL_00080Y_0002	VISTA	2:79161477-79762272
CIL_0004BY	CIL_0004BY_0003	CGP	2:79452521-79672966
CIL_0004BV	CIL_0004BV_0003	CGP	2:79635352-79818496

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003779	IEA	actin binding
GO:0005102	IEA	receptor binding
GO:0005634	IEA	nucleus
GO:0005737	IEA	cytoplasm
GO:0005886	IEA	plasma membrane

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000320370	SSFA2-002	protein_coding	Homo_sapiens	0	3053
ENST00000409001	SSFA2-004	protein_coding	Homo_sapiens	0	2719
ENST00000409136	SSFA2-009	protein_coding	Homo_sapiens	0	2278
ENST00000416081	SSFA2-007	nonsense_mediated_decay	Homo_sapiens	0	3315
ENST00000431877	SSFA2-001	protein_coding	Homo_sapiens	0	3801
ENST00000440623	SSFA2-006	nonsense_mediated_decay	Homo_sapiens	0	2089
ENST00000454579	SSFA2-005	nonsense_mediated_decay	Homo_sapiens	0	2261
ENST00000467172	SSFA2-013	processed_transcript	Homo_sapiens	0	545
ENST00000470654	SSFA2-015	retained_intron	Homo_sapiens	0	710
ENST00000480753	SSFA2-003	retained_intron	Homo_sapiens	0	499
ENST00000491720	SSFA2-008	retained_intron	Homo_sapiens	0	1391
ENST00000495248	SSFA2-014	processed_transcript	Homo_sapiens	0	259

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