C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sperm specific antigen 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000124938  |
Ssfa2-005 |
ENSMUSG00000027007 |
10090 | + |
2:79635461-79636434  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00080Y | CIL_00080Y_0002 | VISTA | 2:79161477-79762272 |
| CIL_0004BY | CIL_0004BY_0003 | CGP | 2:79452521-79672966 |
| CIL_0004BV | CIL_0004BV_0003 | CGP | 2:79635352-79818496 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000320370
|
SSFA2-002 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000409001
|
SSFA2-004 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000431877
|
SSFA2-001 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000440623
|
SSFA2-006 | nonsense_mediated_decay | Homo_sapiens | 4e-38 | 165 |
|
ENST00000454579
|
SSFA2-005 | nonsense_mediated_decay | Homo_sapiens | 2e-39 | 169 |
|
ENST00000480753
|
SSFA2-003 | retained_intron | Homo_sapiens | 0 | 407 |
|
ENST00000495248
|
SSFA2-014 | processed_transcript | Homo_sapiens | 0.00000000000002 | 82 |
