C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sperm specific antigen 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027007 Ssfa2 10090 + 2:79635352-79672966 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111784 Ssfa2-004 79635455-79672966 protein_coding
  ENSMUST00000111785 Ssfa2-001 79635352-79672966 protein_coding
  ENSMUST00000111788 Ssfa2-003 79635426-79672966 protein_coding
  ENSMUST00000124938 Ssfa2-005 79635461-79636434 processed_transcript
  ENSMUST00000133266 Ssfa2-002 79639182-79672966 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111784ENSMUST00000111785ENSMUST00000111788ENSMUST00000133266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111784 N/A N/A N/A N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A 1.994±0.54 4.257±2.60 N/A
ENSMUST00000111785 5.593±1.45 2.540±1.60 10.827±6.49 3.850±3.57 1.840±0.78 12.332±2.11 3.057±0.25 8.653±3.00 2.801±1.37 4.984±1.95 2.620±0.49 3.084±2.32 6.186±3.62 1.648±0.43
ENSMUST00000111788 N/A 5.791±0.55 N/A N/A 1.491±0.88 2.616±0.18 N/A 2.961±0.20 1.453±0.00 2.054±0.14 N/A 1.963±1.26 N/A 0.907±0.31
ENSMUST00000133266 0.504±0.00 N/A N/A N/A 1.513±0.00 N/A 0.581±0.00 N/A 0.921±0.02 N/A 0.537±0.00 5.194±4.43 4.600±3.68 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Y CIL_00080Y_0002 VISTA 2:79161477-79762272
CIL_0004BY CIL_0004BY_0003 CGP 2:79452521-79672966
CIL_0004BV CIL_0004BV_0003 CGP 2:79635352-79818496

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005102 IEA receptor binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038938 ssfa2 sperm specific antigen 2 protein_coding Danio_rerio
ENSG00000138434 SSFA2 sperm specific antigen 2 protein_coding Homo_sapiens

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