C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065989-ENSG00000079999 CGP 9606 19:10416773-10503741
GeneTranscriptPositionBiotype
ENSG00000065989 (PDE4A)
phosphodiesterase 4A, cAMP-specific 		ENST00000293683 (PDE4A-002) 10430845-10467621 protein_coding
ENST00000344979 (PDE4A-004) 10452939-10467931 protein_coding
ENST00000380702 (PDE4A-001) 10420655-10469631 protein_coding
ENST00000440014 (PDE4A-003) 10432435-10467621 protein_coding
ENST00000586275 (PDE4A-009) 10453284-10459730 retained_intron
ENST00000589073 (PDE4A-006) 10452957-10467365 nonsense_mediated_decay
ENST00000590407 (PDE4A-007) 10458969-10467366 retained_intron
ENST00000591971 (PDE4A-008) 10450831-10461929 protein_coding
ENST00000592685 (PDE4A-005) 10416773-10467649 protein_coding
ENSG00000079999 (KEAP1)
kelch-like ECH-associated protein 1 		ENST00000171111 (KEAP1-001) 10486120-10503741 protein_coding
ENST00000393623 (KEAP1-002) 10486126-10502896 protein_coding
ENST00000585845 (KEAP1-010) 10491999-10503558 nonsense_mediated_decay
ENST00000588024 (KEAP1-007) 10491947-10499509 processed_transcript
ENST00000590237 (KEAP1-009) 10486612-10489435 retained_intron
ENST00000590593 (KEAP1-008) 10486718-10491880 nonsense_mediated_decay
ENST00000591039 (KEAP1-006) 10499398-10502685 protein_coding
ENST00000591419 (KEAP1-005) 10499395-10502687 protein_coding
ENST00000592055 (KEAP1-004) 10492064-10503186 protein_coding
ENST00000592478 (KEAP1-003) 10486125-10491720 protein_coding
ENSG00000105401 (CDC37)
cell division cycle 37 		ENST00000222005 (CDC37-001) 10391134-10403533 protein_coding
ENST00000588498 (CDC37-005) 10393408-10395991 retained_intron
ENST00000588869 (CDC37-010) 10395023-10403511 nonsense_mediated_decay
ENST00000589331 (CDC37-007) 10392776-10393413 protein_coding
ENST00000589625 (CDC37-009) 10391518-10395268 protein_coding
ENST00000589629 (CDC37-003) 10393095-10403517 protein_coding
ENST00000589755 (CDC37-006) 10393291-10395837 retained_intron
ENST00000590632 (CDC37-008) 10393085-10393786 retained_intron
ENST00000591248 (CDC37-002) 10391453-10403530 retained_intron
ENST00000593124 (CDC37-004) 10393260-10420121 protein_coding
ENSG00000267197 (CTC-429L19.3)
 ENST00000592671 (CTC-429L19.3-001) 10490339-10491000 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0004FB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032177-ENSMUSG00000003308 CGP 10090 9:21165714-21239332
GeneTranscriptPositionBiotype
ENSMUSG00000003308 (Keap1)
kelch-like ECH-associated protein 1 		ENSMUST00000049567 (Keap1-201) 21229730-21239332 protein_coding
ENSMUST00000164812 (Keap1-202) 21229730-21239332 protein_coding
ENSMUSG00000032177 (Pde4a)
phosphodiesterase 4A, cAMP specific 		ENSMUST00000003395 (Pde4a-003) 21196705-21211627 protein_coding
ENSMUST00000039413 (Pde4a-001) 21165714-21213248 protein_coding
ENSMUST00000115458 (Pde4a-002) 21184103-21211627 protein_coding
ENSMUST00000127821 (Pde4a-006) 21192197-21194759 retained_intron
ENSMUST00000131769 (Pde4a-004) 21181616-21211627 retained_intron
ENSMUST00000140440 (Pde4a-005) 21184101-21193498 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FB_0001ENSG00000065989ENST00000293683ENST00000344979ENST00000380702ENST00000440014ENST00000586275ENST00000589073ENST00000590407ENST00000591971ENST00000592685ENSG00000079999ENST00000171111ENST00000393623ENST00000585845ENST00000588024ENST00000590237ENST00000590593ENST00000591039ENST00000591419ENST00000592055ENST00000592478ENSG00000105401ENST00000222005ENST00000588498ENST00000588869ENST00000589331ENST00000589625ENST00000589629ENST00000589755ENST00000590632ENST00000591248ENST00000593124ENSG00000267197ENST00000592671CIL_0004FB_0002ENSMUSG00000003308ENSMUST00000049567ENSMUST00000164812ENSMUSG00000032177ENSMUST00000003395ENSMUST00000039413ENSMUST00000115458ENSMUST00000127821ENSMUST00000131769ENSMUST00000140440
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FB_0001ENSG00000065989ENST00000293683ENST00000344979ENST00000380702ENST00000440014ENST00000589073ENST00000590407ENST00000591971ENST00000592685ENSG00000079999ENST00000171111ENST00000393623ENST00000585845ENST00000590237ENST00000590593ENST00000592478ENSG00000105401ENST00000222005ENST00000589625ENST00000589629ENST00000589755ENST00000590632ENST00000591248ENSG00000267197ENST00000592671CIL_0004FB_0002ENSMUSG00000003308ENSMUST00000049567ENSMUST00000164812ENSMUSG00000032177ENSMUST00000003395ENSMUST00000039413ENSMUST00000115458ENSMUST00000131769
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065989 ENST00000293683 2.522±0.00 N/A N/A 0.343±0.00 N/A 0.407±0.00 N/A 1.147±0.00 0.499±0.00 N/A N/A 2.695±1.98 N/A 3.454±0.56
ENST00000344979 N/A N/A N/A 1.317±0.00 N/A N/A N/A 0.090±0.00 N/A 0.217±0.00 0.854±0.00 N/A N/A 15.279±0.00
ENST00000380702 N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 2.711±0.00 N/A 1.112±0.00 N/A N/A
ENST00000440014 N/A N/A N/A 0.392±0.00 0.339±0.00 N/A 0.262±0.00 N/A N/A 0.898±0.00 1.098±0.00 N/A 1.806±0.00 N/A
ENST00000586275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589073 N/A N/A N/A N/A 1.472±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590407 N/A N/A 0.201±0.00 N/A 0.380±0.00 N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A N/A
ENST00000591971 N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A
ENST00000592685 N/A N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A N/A N/A 1.052±0.00 N/A 5.056±0.00
ENSG00000079999 ENST00000171111 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.455±0.00 N/A 5.471±0.00 N/A N/A
ENST00000393623 30.654±0.00 13.845±0.00 N/A 17.096±0.00 19.742±0.00 8.431±6.39 12.108±10.56 13.484±0.00 4.498±0.00 3.287±0.00 100.255±0.00 17.541±14.37 9.983±0.62 15.460±7.98
ENST00000585845 N/A N/A N/A N/A 4.861±0.00 N/A N/A N/A 3.961±0.00 N/A 7.756±0.00 4.355±0.00 N/A N/A
ENST00000588024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590237 N/A N/A 4.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.002±0.00 N/A N/A
ENST00000590593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.578±0.00 21.750±0.00 10.738±0.00
ENST00000591039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592478 N/A 8.116±0.00 N/A 10.692±0.00 N/A 11.269±0.00 N/A 12.258±0.00 5.258±4.43 N/A N/A 8.749±0.00 6.605±0.00 17.154±0.00
ENSG00000105401 ENST00000222005 73.861±0.00 71.718±0.00 2.442±0.00 23.789±7.68 34.398±23.70 42.789±33.47 29.891±25.92 27.158±17.08 21.303±13.60 55.357±45.15 44.026±33.85 75.737±44.71 115.175±12.15 64.604±1.69
ENST00000588498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589625 N/A N/A N/A N/A N/A N/A N/A 41.226±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589629 40.918±0.00 N/A 3.532±0.00 N/A N/A N/A N/A 2.628±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589755 N/A N/A N/A 39.523±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590632 N/A N/A 3.597±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591248 27.826±0.00 54.181±0.00 2.160±0.00 21.187±0.00 48.912±0.00 14.134±10.69 1.896±0.00 23.918±0.00 3.144±0.00 42.444±0.00 10.400±0.00 24.897±20.04 N/A 23.524±0.00
ENST00000593124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267197 ENST00000592671 N/A 0.326±0.00 N/A 0.459±0.37 N/A 0.204±0.00 0.184±0.00 0.121±0.00 0.145±0.00 0.311±0.00 N/A 0.434±0.32 N/A 0.131±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003308 ENSMUST00000049567 22.004±1.28 14.611±9.32 14.760±0.36 22.773±10.97 17.364±6.16 6.641±0.97 10.042±4.84 14.064±4.42 9.893±2.23 15.734±7.16 14.361±4.81 18.757±7.47 13.447±4.75 20.999±4.26
ENSMUST00000164812 3.091±0.41 9.104±3.09 1.555±0.15 1.735±0.22 6.207±3.01 3.568±0.29 2.552±0.36 2.109±0.74 2.407±0.66 4.209±1.50 3.785±0.57 6.123±2.08 1.360±0.17 2.666±0.00
ENSMUSG00000032177 ENSMUST00000003395 N/A N/A N/A 7.542±5.24 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.826±0.00
ENSMUST00000039413 0.785±0.22 1.368±0.74 1.852±0.06 3.355±0.68 1.285±0.41 0.513±0.13 1.958±0.00 0.702±0.27 0.272±0.13 1.762±0.55 N/A 0.963±0.37 0.925±0.43 N/A
ENSMUST00000115458 1.347±0.28 3.052±0.49 N/A 7.910±0.00 1.949±0.58 0.780±0.24 4.759±0.00 N/A 0.415±0.18 1.043±0.05 2.538±0.00 1.093±0.34 0.571±0.00 N/A
ENSMUST00000127821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131769 1.253±0.29 1.386±0.24 0.568±0.00 N/A 0.839±0.00 0.662±0.12 N/A 0.462±0.08 0.217±0.06 N/A N/A 1.070±0.34 0.551±0.20 N/A
ENSMUST00000140440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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