C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15 pseudogene 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432924 RPL15P18-001 ENSG00000228501 9606 - 13:100150481-100151092 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000432924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000432924 0.183±0.00 0.222±0.00 0.137±0.00 0.106±0.00 0.164±0.00 0.161±0.04 0.162±0.03 0.113±0.00 0.089±0.00 0.275±0.00 0.103±0.03 0.322±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LI CIL_0007LI_0001 UCNEbase 13:99687864-100523501
CIL_0004G2 CIL_0004G2_0002 CGP 13:99981772-100530435
CIL_0000WI CIL_0000WI_0001 CGP 13:100089015-100589528

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 771
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 771
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 771
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 771
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 765
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 765
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 370
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 0 195

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