C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L26, pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170279 Rpl26-ps4-201 ENSMUSG00000059150 10090 + 16:17711668-17712105 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000170279
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000170279 0.663±0.39 0.333±0.00 0.811±0.51 0.476±0.12 0.242±0.00 0.572±0.25 0.390±0.19 0.417±0.31 0.163±0.00 1.338±1.26 0.325±0.08 0.353±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_0004HX CIL_0004HX_0002 CGP 16:17646470-17722930

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293842 RPL26-001 protein_coding Homo_sapiens 0 453
ENST00000414397 RP11-524O24.2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000424037 RP11-416L21.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000431047 AC005534.6-001 processed_pseudogene Homo_sapiens 0 348
ENST00000450941 AC022431.1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000451325 RP11-445P17.5-001 processed_pseudogene Homo_sapiens 0 303
ENST00000472981 RP11-796G6.1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000495560 AC090453.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000498788 RP11-112N23.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000515352 CTD-2517O10.5-001 processed_pseudogene Homo_sapiens 0 193
ENST00000578115 RPL26-002 retained_intron Homo_sapiens 0 204
ENST00000578812 RPL26-003 protein_coding Homo_sapiens 0 331
ENST00000582471 KRBA2-001 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000582485 RPL26-013 protein_coding Homo_sapiens 0 383
ENST00000582556 RPL26-005 protein_coding Homo_sapiens 0 453
ENST00000583011 RPL26-007 protein_coding Homo_sapiens 0 453
ENST00000583515 RPL26-006 protein_coding Homo_sapiens 0 309
ENST00000584164 RPL26-004 protein_coding Homo_sapiens 0 453
ENST00000584343 RPL26-008 protein_coding Homo_sapiens 0 342
ENST00000584906 RPL26-010 nonsense_mediated_decay Homo_sapiens 0 202

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