C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004LD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172869-ENSG00000145779 CGP 9606 5:119037772-119399688
GeneTranscriptPositionBiotype
ENSG00000145779 (TNFAIP8)
tumor necrosis factor, alpha-induced protein 8 		ENST00000274456 (TNFAIP8-006) 119268692-119393394 protein_coding
ENST00000388882 (TNFAIP8-008) 119268754-119393084 protein_coding
ENST00000415806 (TNFAIP8-003) 119356035-119394599 protein_coding
ENST00000503646 (TNFAIP8-002) 119354773-119394598 protein_coding
ENST00000504642 (TNFAIP8-004) 119355313-119393446 protein_coding
ENST00000504771 (TNFAIP8-001) 119354314-119399688 protein_coding
ENST00000513374 (TNFAIP8-007) 119333175-119393743 protein_coding
ENSG00000172869 (DMXL1)
Dmx-like 1 		ENST00000311085 (DMXL1-001) 119071490-119249127 protein_coding
ENST00000502516 (DMXL1-013) 119197758-119206892 processed_transcript
ENST00000503802 (DMXL1-002) 119071205-119133691 protein_coding
ENST00000504031 (DMXL1-012) 119129209-119133485 retained_intron
ENST00000504497 (DMXL1-008) 119167629-119170535 processed_transcript
ENST00000505312 (DMXL1-004) 119206497-119249138 processed_transcript
ENST00000507552 (DMXL1-009) 119170716-119171907 processed_transcript
ENST00000509902 (DMXL1-006) 119037772-119104280 processed_transcript
ENST00000510924 (DMXL1-014) 119071529-119105259 processed_transcript
ENST00000511622 (DMXL1-005) 119197819-119237414 processed_transcript
ENST00000512281 (DMXL1-010) 119134226-119147582 retained_intron
ENST00000514151 (DMXL1-011) 119105223-119129332 processed_transcript
ENST00000514595 (DMXL1-003) 119236314-119249120 retained_intron
ENST00000515335 (DMXL1-007) 119100601-119102210 processed_transcript
ENST00000539542 (DMXL1-201) 119071389-119249127 protein_coding
ENSG00000206786 (RNU6-701P)
RNA, U6 small nuclear 701, pseudogene 		ENST00000384059 (RNU6-701P-201) 119138859-119138965 snRNA
ENSG00000243333 (RN7SL174P)
RNA, 7SL, cytoplasmic 174, pseudogene 		ENST00000475578 (RN7SL174P-201) 119306343-119306631 misc_RNA
ENSG00000248885 (RP11-950K24.2)
 ENST00000513820 (RP11-950K24.2-001) 119126782-119128444 processed_pseudogene
ENSG00000248979 (LAMTOR3P2)
late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 pseudogene 2 		ENST00000504479 (LAMTOR3P2-001) 119132651-119132882 processed_pseudogene
ENSG00000249494 (CTB-161M19.4)
 ENST00000504820 (CTB-161M19.4-002) 119011803-119070890 antisense
ENST00000506486 (CTB-161M19.4-001) 119006347-119037668 antisense
ENST00000510128 (CTB-161M19.4-003) 119019915-119070861 antisense
ENSG00000266587 (AC027320.1)
 ENST00000578612 (AC027320.1-201) 119257340-119257437 miRNA
ENSG00000275541 (AC118465.1)
 ENST00000614201 (AC118465.1-201) 119163298-119163388 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004LD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037416-ENSMUSG00000062210 CGP 10090 18:49832670-50107173
GeneTranscriptPositionBiotype
ENSMUSG00000037416 (Dmxl1)
Dmx-like 1 		ENSMUST00000041772 (Dmxl1-201) 49832997-49965473 protein_coding
ENSMUST00000180611 (Dmxl1-001) 49832670-49964254 protein_coding
ENSMUST00000181042 (Dmxl1-004) 49955975-49959643 retained_intron
ENSMUST00000181828 (Dmxl1-003) 49950099-49954711 retained_intron
ENSMUST00000181907 (Dmxl1-002) 49894096-49933274 retained_intron
ENSMUSG00000062210 (Tnfaip8)
tumor necrosis factor, alpha-induced protein 8 		ENSMUST00000087655 (Tnfaip8-011) 49979491-50051320 processed_transcript
ENSMUST00000124175 (Tnfaip8-005) 50031028-50046427 processed_transcript
ENSMUST00000126666 (Tnfaip8-002) 50019567-50090794 protein_coding
ENSMUST00000128377 (Tnfaip8-004) 50031029-50090686 protein_coding
ENSMUST00000134348 (Tnfaip8-007) 50051718-50090357 protein_coding
ENSMUST00000145726 (Tnfaip8-003) 50031018-50090851 protein_coding
ENSMUST00000148159 (Tnfaip8-001) 50053282-50091782 protein_coding
ENSMUST00000148989 (Tnfaip8-012) 49979427-50091001 protein_coding
ENSMUST00000153545 (Tnfaip8-009) 49979535-50107173 processed_transcript
ENSMUST00000153873 (Tnfaip8-008) 50051721-50090470 protein_coding
ENSMUST00000155403 (Tnfaip8-006) 50051710-50053415 retained_intron
ENSMUST00000179937 (Tnfaip8-010) 49979529-50093229 protein_coding
ENSMUST00000180305 (Tnfaip8-201) 50046740-50047152 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LD_0001ENSG00000145779ENST00000274456ENST00000415806ENST00000503646ENST00000504642ENST00000504771ENST00000513374ENSG00000172869ENST00000311085ENST00000503802ENST00000505312ENST00000514595ENST00000539542ENSG00000206786ENST00000384059ENSG00000243333ENST00000475578ENSG00000248885ENST00000513820ENSG00000248979ENST00000504479ENSG00000249494ENST00000504820ENST00000506486ENST00000510128ENSG00000266587ENST00000578612ENSG00000275541ENST00000614201CIL_0004LD_0002ENSMUSG00000037416ENSMUST00000041772ENSMUST00000180611ENSMUSG00000062210ENSMUST00000087655ENSMUST00000126666ENSMUST00000128377ENSMUST00000134348ENSMUST00000145726ENSMUST00000148159ENSMUST00000148989ENSMUST00000179937
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145779 ENST00000274456 N/A N/A N/A N/A N/A N/A N/A N/A 2.418±0.00 N/A N/A 1.088±0.00 N/A N/A
ENST00000388882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415806 10.869±0.00 15.701±0.00 N/A 0.922±0.00 11.363±0.00 3.222±0.00 1.039±0.62 2.070±1.84 0.964±0.40 4.499±2.67 0.252±0.17 1.672±0.81 13.425±9.04 3.230±1.68
ENST00000503646 N/A N/A 1.160±0.00 N/A 2.280±0.00 1.029±0.00 N/A N/A 0.768±0.00 N/A N/A 0.639±0.00 N/A N/A
ENST00000504642 N/A N/A 1.509±0.00 0.669±0.00 4.036±0.00 6.538±0.00 2.146±0.00 3.110±0.00 3.248±0.00 10.471±0.00 N/A 1.115±0.00 N/A N/A
ENST00000504771 N/A N/A 0.265±0.00 0.034±0.00 0.202±0.00 0.543±0.00 0.094±0.00 0.276±0.13 0.509±0.00 0.957±0.11 N/A 0.135±0.01 N/A 0.183±0.10
ENST00000513374 N/A N/A N/A 0.120±0.00 1.668±0.00 1.450±0.00 1.124±0.00 N/A N/A 4.552±0.00 N/A 0.574±0.00 N/A N/A
ENSG00000172869 ENST00000311085 0.380±0.00 1.253±0.00 N/A 2.372±0.37 1.651±0.61 2.045±0.71 1.539±0.28 1.375±0.58 1.775±1.17 2.278±1.19 N/A 1.450±0.89 0.226±0.00 1.287±0.21
ENST00000502516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503802 N/A N/A 5.764±0.00 N/A N/A 4.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505312 0.947±0.00 1.875±0.00 N/A N/A N/A 1.391±0.00 N/A 2.264±0.00 N/A N/A N/A 0.970±0.48 0.600±0.33 N/A
ENST00000507552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.580±0.00 N/A 1.802±0.00
ENST00000515335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539542 1.470±0.00 0.472±0.00 N/A 4.600±0.00 N/A 0.688±0.00 N/A N/A N/A N/A N/A 0.820±0.54 0.163±0.00 N/A
ENSG00000206786 ENST00000384059 0.180±0.00 N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243333 ENST00000475578 0.404±0.00 0.145±0.00 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000248885 ENST00000513820 0.015±0.00 0.140±0.00 0.216±0.00 0.015±0.00 0.124±0.01 0.020±0.00 0.022±0.00 0.008±0.00 0.023±0.00 0.237±0.00 N/A 0.064±0.06 N/A 0.007±0.00
ENSG00000248979 ENST00000504479 N/A 0.051±0.00 4.068±0.00 1.667±1.46 0.625±0.00 N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A 0.195±0.00
ENSG00000249494 ENST00000504820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A
ENST00000506486 0.052±0.00 0.205±0.00 N/A 0.104±0.00 0.137±0.00 0.063±0.00 0.048±0.00 0.151±0.00 N/A 0.218±0.00 N/A N/A N/A 0.418±0.00
ENST00000510128 N/A N/A N/A 0.303±0.22 N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 0.143±0.02 0.145±0.00
ENSG00000266587 ENST00000578612 0.763±0.00 1.918±0.00 N/A 1.759±0.00 1.448±0.00 N/A 0.262±0.00 1.133±0.00 N/A N/A N/A 159.939±0.00 N/A 0.743±0.00
ENSG00000275541 ENST00000614201 N/A 0.773±0.00 N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037416 ENSMUST00000041772 N/A 2.153±0.40 0.464±0.00 0.252±0.00 0.493±0.00 N/A N/A N/A 0.420±0.09 N/A 0.359±0.06 N/A N/A N/A
ENSMUST00000180611 3.715±0.70 2.417±0.58 3.066±0.27 2.862±0.79 3.813±0.71 1.746±0.46 2.579±0.56 4.825±0.61 1.755±0.95 3.196±0.79 1.891±0.28 3.762±0.97 4.078±1.78 2.222±0.81
ENSMUST00000181042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062210 ENSMUST00000087655 N/A N/A N/A 0.337±0.03 N/A N/A N/A N/A 0.058±0.01 N/A N/A 0.355±0.04 N/A 0.095±0.04
ENSMUST00000124175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126666 N/A 1.815±0.03 N/A N/A N/A N/A 16.988±3.46 N/A 0.382±0.05 N/A N/A 1.394±0.00 N/A N/A
ENSMUST00000128377 N/A 1.093±0.00 13.247±0.74 N/A 9.077±1.74 9.168±1.14 N/A N/A 2.019±1.66 4.021±0.69 1.498±0.00 3.604±1.06 N/A 0.390±0.08
ENSMUST00000134348 N/A 0.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.000±0.00 N/A N/A
ENSMUST00000145726 8.131±1.56 N/A N/A N/A 7.938±1.06 N/A N/A 129.494±20.92 1.095±0.00 5.483±1.75 0.748±0.00 4.848±1.59 N/A 0.625±0.00
ENSMUST00000148159 5.060±0.39 0.636±0.27 20.031±0.14 2.370±0.26 4.712±1.45 3.470±0.49 10.163±0.68 69.326±8.74 5.006±4.07 2.766±0.42 1.125±0.63 3.956±4.23 33.508±8.10 0.319±0.14
ENSMUST00000148989 15.405±3.40 2.489±1.32 16.074±0.33 2.535±0.56 12.751±3.26 23.410±3.34 9.009±1.25 N/A 5.476±4.55 3.686±1.31 0.478±0.10 2.909±1.80 N/A 0.561±0.16
ENSMUST00000153545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179937 N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.01 N/A N/A 1.060±0.08 N/A 0.114±0.00
ENSMUST00000180305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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