C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504642 TNFAIP8-004 ENSG00000145779 9606 + 5:119355313-119393446 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000504642
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000504642 1.509±0.00 0.669±0.00 4.036±0.00 6.538±0.00 2.146±0.00 3.110±0.00 3.248±0.00 10.471±0.00 1.115±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LD CIL_0004LD_0001 CGP 5:119037772-119399688
CIL_0004LE CIL_0004LE_0001 CGP 5:119268692-119637199

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148159 Tnfaip8-001 protein_coding Mus_musculus 0 627
ENSMUST00000126666 Tnfaip8-002 protein_coding Mus_musculus 0 625
ENSMUST00000148989 Tnfaip8-012 protein_coding Mus_musculus 0 621
ENSMUST00000128377 Tnfaip8-004 protein_coding Mus_musculus 0 525
ENSMUST00000179937 Tnfaip8-010 protein_coding Mus_musculus 0 359
ENSMUST00000153873 Tnfaip8-008 protein_coding Mus_musculus 0 324
ENSMUST00000134348 Tnfaip8-007 protein_coding Mus_musculus 0 207

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