C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148159 Tnfaip8-001 ENSMUSG00000062210 10090 + 18:50053282-50091782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148159 5.060±0.39 0.636±0.27 20.031±0.14 2.370±0.26 4.712±1.45 3.470±0.49 10.163±0.68 69.326±8.74 5.006±4.07 2.766±0.42 1.125±0.63 3.956±4.23 33.508±8.10 0.319±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LD CIL_0004LD_0002 CGP 18:49832670-50107173
CIL_0004LE CIL_0004LE_0002 CGP 18:49979427-50196269

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 ISS cytoplasm
GO:0032611 IMP interleukin-1 beta production
GO:0043027 ISS cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043154 ISS negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0050830 IMP defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274456 TNFAIP8-006 protein_coding Homo_sapiens 0 617
ENST00000388882 TNFAIP8-008 protein_coding Homo_sapiens 0 318
ENST00000415806 TNFAIP8-003 protein_coding Homo_sapiens 0 682
ENST00000503646 TNFAIP8-002 protein_coding Homo_sapiens 0 702
ENST00000504642 TNFAIP8-004 protein_coding Homo_sapiens 0 627
ENST00000504771 TNFAIP8-001 protein_coding Homo_sapiens 0 702
ENST00000513374 TNFAIP8-007 protein_coding Homo_sapiens 0 625

Loading