C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor necrosis factor, alpha-induced protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148989 Tnfaip8-012 ENSMUSG00000062210 10090 + 18:49979427-50091001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000148989
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000148989 15.405±3.40 2.489±1.32 16.074±0.33 2.535±0.56 12.751±3.26 23.410±3.34 9.009±1.25 5.476±4.55 3.686±1.31 0.478±0.10 2.909±1.80 0.561±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LD CIL_0004LD_0002 CGP 18:49832670-50107173
CIL_0004LE CIL_0004LE_0002 CGP 18:49979427-50196269

Gene Ontology

GO IDEvidence TypeGO Description
GO:0032611 IMP interleukin-1 beta production
GO:0050830 IMP defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274456 TNFAIP8-006 protein_coding Homo_sapiens 0 658
ENST00000388882 TNFAIP8-008 protein_coding Homo_sapiens 0 315
ENST00000415806 TNFAIP8-003 protein_coding Homo_sapiens 0 621
ENST00000503646 TNFAIP8-002 protein_coding Homo_sapiens 0 621
ENST00000504642 TNFAIP8-004 protein_coding Homo_sapiens 0 621
ENST00000504771 TNFAIP8-001 protein_coding Homo_sapiens 0 621
ENST00000513374 TNFAIP8-007 protein_coding Homo_sapiens 0 621

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