C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004RZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070729-ENSG00000159648 CGP 9606 16:57882340-57988116
GeneTranscriptPositionBiotype
ENSG00000070729 (CNGB1)
cyclic nucleotide gated channel beta 1 		ENST00000251102 (CNGB1-001) 57882340-57971112 protein_coding
ENST00000311183 (CNGB1-002) 57954675-57971116 protein_coding
ENST00000562761 (CNGB1-004) 57960006-57967352 protein_coding
ENST00000564448 (CNGB1-003) 57883599-57971112 protein_coding
ENST00000564450 (CNGB1-007) 57923113-57939549 retained_intron
ENST00000564654 (CNGB1-006) 57931765-57946625 processed_transcript
ENST00000565942 (CNGB1-008) 57884368-57901373 protein_coding
ENST00000567568 (CNGB1-005) 57963925-57971109 retained_intron
ENST00000569643 (CNGB1-009) 57897856-57911901 retained_intron
ENSG00000159648 (TEPP)
testis, prostate and placenta expressed 		ENST00000290871 (TEPP-001) 57976435-57987571 protein_coding
ENST00000441824 (TEPP-002) 57976435-57987571 protein_coding
ENST00000562915 (TEPP-003) 57985181-57988116 retained_intron
ENST00000569996 (TEPP-004) 57976578-57987523 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0004RZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031789-ENSMUSG00000090206 CGP 10090 8:95239045-95326323
GeneTranscriptPositionBiotype
ENSMUSG00000031789 (Cngb1)
cyclic nucleotide gated channel beta 1 		ENSMUST00000093268 (Cngb1-004) 95290593-95306585 protein_coding
ENSMUST00000119870 (Cngb1-001) 95239045-95306585 protein_coding
ENSMUST00000120044 (Cngb1-002) 95240981-95281590 protein_coding
ENSMUST00000121162 (Cngb1-003) 95240987-95281610 protein_coding
ENSMUST00000133716 (Cngb1-006) 95290593-95303837 retained_intron
ENSMUST00000134207 (Cngb1-007) 95290593-95303837 retained_intron
ENSMUST00000156514 (Cngb1-005) 95290596-95306570 retained_intron
ENSMUST00000184103 (Cngb1-008) 95290593-95294074 protein_coding
ENSMUST00000184621 (Cngb1-009) 95290593-95293669 retained_intron
ENSMUSG00000046556 (Zfp319)
zinc finger protein 319 		ENSMUST00000057717 (Zfp319-201) 95326137-95331950 protein_coding
ENSMUSG00000074140 (Zfp319)
 ENSMUST00000098479 (Zfp319-202) 95323014-95325263 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RZ_0001ENSG00000070729ENST00000251102ENST00000311183ENST00000562761ENST00000564448ENST00000564450ENST00000564654ENST00000565942ENST00000567568ENST00000569643ENSG00000159648ENST00000290871ENST00000441824ENST00000562915ENST00000569996CIL_0004RZ_0002ENSMUSG00000031789ENSMUST00000093268ENSMUST00000119870ENSMUST00000120044ENSMUST00000121162ENSMUST00000133716ENSMUST00000134207ENSMUST00000156514ENSMUST00000184103ENSMUST00000184621ENSMUSG00000046556ENSMUST00000057717ENSMUSG00000074140ENSMUST00000098479
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RZ_0001ENSG00000070729ENST00000251102ENST00000311183ENST00000562761ENST00000564448ENST00000564450ENST00000564654ENST00000565942ENST00000569643ENSG00000159648ENST00000290871ENST00000441824ENST00000562915ENST00000569996CIL_0004RZ_0002ENSMUSG00000031789ENSMUST00000093268ENSMUST00000119870ENSMUST00000120044ENSMUST00000121162ENSMUST00000184103ENSMUST00000184621ENSMUSG00000046556ENSMUST00000057717ENSMUSG00000074140ENSMUST00000098479
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070729 ENST00000251102 N/A 0.026±0.00 N/A N/A 0.004±0.00 N/A 0.009±0.00 0.014±0.00 N/A N/A N/A 0.074±0.05 0.235±0.00 N/A
ENST00000311183 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 0.166±0.00 0.099±0.04
ENST00000562761 N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A 0.479±0.00 N/A N/A N/A N/A
ENST00000564448 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A 0.029±0.00
ENST00000564450 N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A
ENST00000564654 N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565942 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A 0.530±0.00 N/A N/A
ENST00000567568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.686±0.00 0.710±0.00 N/A
ENSG00000159648 ENST00000290871 N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.090±0.00
ENST00000441824 N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A 0.412±0.00 0.143±0.02 5.439±0.00
ENST00000562915 0.129±0.00 0.143±0.00 N/A 0.017±0.00 0.035±0.00 0.053±0.00 0.027±0.00 0.095±0.00 N/A 0.216±0.02 N/A 0.197±0.16 0.033±0.01 0.526±0.40
ENST00000569996 N/A 0.756±0.00 N/A 0.274±0.00 N/A 0.161±0.00 N/A 0.059±0.00 0.108±0.00 N/A N/A N/A 0.072±0.00 1.978±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031789 ENSMUST00000093268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.767±0.17
ENSMUST00000119870 0.070±0.02 0.019±0.00 N/A N/A 0.061±0.00 0.034±0.01 0.065±0.00 0.027±0.01 0.006±0.00 0.069±0.04 0.052±0.03 0.206±0.07 0.010±0.00 0.331±0.13
ENSMUST00000120044 0.113±0.00 0.263±0.01 N/A 0.015±0.00 0.094±0.02 0.077±0.03 0.062±0.00 0.041±0.02 N/A 0.098±0.07 0.055±0.03 0.244±0.06 0.032±0.00 0.293±0.00
ENSMUST00000121162 N/A 0.074±0.02 N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A 0.255±0.03
ENSMUST00000133716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184103 0.794±0.31 0.126±0.00 0.684±0.09 0.108±0.00 0.448±0.17 0.126±0.00 0.236±0.01 0.234±0.13 0.178±0.11 0.724±0.16 0.243±0.10 2.416±1.75 0.134±0.00 1.787±0.00
ENSMUST00000184621 N/A 0.328±0.00 N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A 0.973±0.00 N/A N/A
ENSMUSG00000046556 ENSMUST00000057717 5.356±1.33 6.927±0.47 5.063±0.08 10.547±4.92 6.191±3.03 7.255±0.35 2.573±0.63 3.544±0.28 1.452±0.32 11.535±1.51 1.295±0.32 8.953±2.66 4.933±1.17 3.303±1.28
ENSMUSG00000074140 ENSMUST00000098479 2.751±0.98 1.851±0.20 2.676±0.49 5.271±2.98 2.538±0.81 2.141±0.22 1.532±0.21 1.655±0.20 0.548±0.12 5.236±0.84 0.440±0.12 3.585±0.62 1.347±0.55 2.885±0.71

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