C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Leber congenital amaurosis 5-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480612 LCA5L-011 ENSG00000157578 9606 - 21:39443459-39445753 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GM CIL_0003GM_0001 CGP 21:39342315-39428528
CIL_0003GP CIL_0003GP_0001 CGP 21:39380244-39445805
CIL_0004WM CIL_0004WM_0001 CGP 21:39405844-39515506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135387 Trim24-008 retained_intron Mus_musculus 0.00000000001 75
ENSMUST00000189556 St8sia4-004 protein_coding Mus_musculus 0.00000000001 75
ENSMUST00000086274 Gm10490-201 protein_coding Mus_musculus 0.00000000004 73
ENSMUST00000108055 Kif24-001 protein_coding Mus_musculus 0.000000002 68
ENSMUST00000175682 Kdm2a-003 retained_intron Mus_musculus 0.00000002 64

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