C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004YM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000028192-ENSDARG00000045557 CGP 7955 4:17451437-17505083
GeneTranscriptPositionBiotype
ENSDARG00000028192 (cradd)
CASP2 and RIPK1 domain containing adaptor with death domain 		ENSDART00000033717 (cradd-001) 17451437-17484750 protein_coding
ENSDARG00000045557 (socs2)
suppressor of cytokine signaling 2 		ENSDART00000035358 (socs2-201) 17501037-17503108 protein_coding
ENSDART00000141671 (socs2-001) 17500366-17505083 protein_coding
CIL_0004YM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045867-ENSMUSG00000020027 CGP 10090 10:95174746-95417180
GeneTranscriptPositionBiotype
ENSMUSG00000020027 (Socs2)
suppressor of cytokine signaling 2 		ENSMUST00000020215 (Socs2-001) 95411490-95416857 protein_coding
ENSMUST00000119917 (Socs2-008) 95412616-95415283 protein_coding
ENSMUST00000128363 (Socs2-004) 95413502-95416668 processed_transcript
ENSMUST00000128854 (Socs2-010) 95388354-95412734 processed_transcript
ENSMUST00000129942 (Socs2-005) 95413062-95416212 protein_coding
ENSMUST00000130784 (Socs2-003) 95387667-95392967 retained_intron
ENSMUST00000134918 (Socs2-009) 95412420-95414827 processed_transcript
ENSMUST00000135822 (Socs2-012) 95413010-95417180 protein_coding
ENSMUST00000139210 (Socs2-002) 95385362-95413109 nonsense_mediated_decay
ENSMUST00000145847 (Socs2-006) 95415091-95415999 processed_transcript
ENSMUST00000150432 (Socs2-007) 95413038-95415484 protein_coding
ENSMUST00000155148 (Socs2-011) 95401336-95412994 processed_transcript
ENSMUST00000170690 (Socs2-201) 95411490-95416212 protein_coding
ENSMUST00000172070 (Socs2-202) 95411490-95415484 protein_coding
ENSMUSG00000045867 (Cradd)
CASP2 and RIPK1 domain containing adaptor with death domain 		ENSMUST00000053594 (Cradd-201) 95174746-95324097 protein_coding
ENSMUSG00000100550 (RP23-261G3.2)
RIKEN cDNA 2310039L15 gene 		ENSMUST00000185313 (RP23-261G3.2-001) 95336276-95363216 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YM_0001ENSDARG00000028192ENSDART00000033717ENSDARG00000045557ENSDART00000035358ENSDART00000141671CIL_0004YM_0002ENSMUSG00000020027ENSMUST00000020215ENSMUST00000119917ENSMUST00000128363ENSMUST00000128854ENSMUST00000129942ENSMUST00000130784ENSMUST00000134918ENSMUST00000135822ENSMUST00000139210ENSMUST00000145847ENSMUST00000150432ENSMUST00000155148ENSMUST00000170690ENSMUST00000172070ENSMUSG00000045867ENSMUST00000053594ENSMUSG00000100550ENSMUST00000185313
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YM_0001ENSDARG00000028192ENSDART00000033717ENSDARG00000045557ENSDART00000035358ENSDART00000141671CIL_0004YM_0002ENSMUSG00000020027ENSMUST00000020215ENSMUST00000119917ENSMUST00000129942ENSMUST00000134918ENSMUST00000135822ENSMUST00000139210ENSMUST00000145847ENSMUST00000170690ENSMUST00000172070ENSMUSG00000045867ENSMUST00000053594ENSMUSG00000100550ENSMUST00000185313
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028192 ENSDART00000033717 N/A N/A N/A 1.744±1.49 N/A N/A 2.398±0.22 1.157±0.00 0.081±0.00 N/A 1.224±0.00 N/A N/A N/A
ENSDARG00000045557 ENSDART00000035358 N/A N/A N/A N/A N/A N/A N/A N/A 5.295±0.00 N/A 2.535±0.00 N/A N/A N/A
ENSDART00000141671 N/A N/A N/A 4.946±0.00 N/A N/A 1.601±0.00 N/A 2.004±0.00 N/A 2.091±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020027 ENSMUST00000020215 8.019±6.34 11.327±1.17 4.758±1.14 11.693±7.97 12.587±3.53 11.214±1.68 8.488±1.11 13.309±3.57 8.199±6.57 30.872±10.86 2.631±1.29 53.289±14.69 2.416±1.98 0.695±0.32
ENSMUST00000119917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.674±0.00
ENSMUST00000128363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129942 N/A N/A N/A N/A N/A 6.150±0.00 N/A N/A N/A N/A N/A N/A N/A 1.016±0.02
ENSMUST00000130784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134918 N/A N/A N/A N/A 6.590±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135822 N/A 10.942±1.21 N/A N/A 17.867±0.54 16.075±2.52 N/A N/A 7.736±2.83 N/A N/A 60.443±7.92 N/A N/A
ENSMUST00000139210 0.405±0.00 N/A 0.602±0.01 2.163±0.03 0.837±0.00 N/A 1.329±0.00 N/A N/A N/A 0.368±0.12 2.602±0.00 N/A 0.009±0.00
ENSMUST00000145847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.925±2.01 N/A 1.123±0.00
ENSMUST00000150432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170690 N/A N/A 1.131±0.00 N/A N/A N/A N/A N/A 0.312±0.00 N/A 2.147±0.00 10.870±5.90 N/A N/A
ENSMUST00000172070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.277±0.00 39.825±0.63 N/A N/A
ENSMUSG00000045867 ENSMUST00000053594 4.362±0.72 11.866±1.48 4.171±0.27 2.465±0.96 7.218±2.52 6.640±0.51 3.425±1.65 6.060±1.74 5.700±4.25 5.057±1.78 3.290±0.49 11.596±4.43 1.320±0.39 0.267±0.11
ENSMUSG00000100550 ENSMUST00000185313 0.223±0.09 0.240±0.10 0.088±0.06 0.273±0.10 0.260±0.18 0.153±0.01 2.651±0.41 0.533±0.11 0.129±0.09 0.484±0.19 0.221±0.09 0.493±0.12 0.488±0.49 1.320±0.40

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