C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of cytokine signaling 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135822 Socs2-012 ENSMUSG00000020027 10090 - 10:95413010-95417180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryENSMUST00000135822
Transcript ID Adrenal Breast Colon Liver Ovary
ENSMUST00000135822 10.942±1.21 17.867±0.54 16.075±2.52 7.736±2.83 60.443±7.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YM CIL_0004YM_0002 CGP 10:95174746-95417180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 IEA regulation of cell growth
GO:0005131 IPI growth hormone receptor binding
GO:0005159 IEA insulin-like growth factor receptor binding
GO:0005737 IEA cytoplasm
GO:0007595 IGI lactation
GO:0008269 IEA JAK pathway signal transduction adaptor activity
GO:0035556 IMP intracellular signal transduction
GO:0040014 IMP regulation of multicellular organism growth
GO:0040015 IGI negative regulation of multicellular organism growth
GO:0045666 IDA positive regulation of neuron differentiation
GO:0046426 IGI negative regulation of JAK-STAT cascade
GO:0060749 IGI mammary gland alveolus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340600 SOCS2-001 protein_coding Homo_sapiens 0 420
ENST00000536696 SOCS2-007 protein_coding Homo_sapiens 0 420
ENST00000548091 SOCS2-008 protein_coding Homo_sapiens 0 418
ENST00000548537 SOCS2-005 protein_coding Homo_sapiens 0 246
ENST00000549122 SOCS2-006 protein_coding Homo_sapiens 0 420
ENST00000549206 SOCS2-002 protein_coding Homo_sapiens 0 422
ENST00000549887 SOCS2-009 protein_coding Homo_sapiens 0 422
ENST00000551556 SOCS2-011 protein_coding Homo_sapiens 0 420
ENST00000622746 SOCS2-201 protein_coding Homo_sapiens 0 422

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