C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005G6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065923-ENSG00000102218 CGP 9606 X:46599252-46882358
GeneTranscriptPositionBiotype
ENSG00000065923 (SLC9A7)
solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 		ENST00000328306 (SLC9A7-001) 46605318-46759055 protein_coding
ENST00000464933 (SLC9A7-003) 46606261-46635634 processed_transcript
ENST00000489574 (SLC9A7-004) 46606295-46669686 processed_transcript
ENST00000491894 (SLC9A7-002) 46606295-46621016 processed_transcript
ENST00000616978 (SLC9A7-201) 46599252-46759172 protein_coding
ENSG00000102218 (RP2)
retinitis pigmentosa 2 (X-linked recessive) 		ENST00000218340 (RP2-001) 46836940-46882358 protein_coding
ENSG00000213997 (PGAM1P7)
phosphoglycerate mutase 1 pseudogene 7 		ENST00000413837 (PGAM1P7-001) 46646594-46647330 processed_pseudogene
ENSG00000215284 (RP11-198M15.1)
 ENST00000399931 (RP11-198M15.1-001) 46725164-46725818 processed_pseudogene
ENSG00000226048 (YBX1P8)
Y box binding protein 1 pseudogene 8 		ENST00000421881 (YBX1P8-001) 46684765-46685707 processed_pseudogene
CIL_0005G6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037341-ENSMUSG00000060090 CGP 10090 X:20105755-20405653
GeneTranscriptPositionBiotype
ENSMUSG00000037341 (Slc9a7)
solute carrier family 9 (sodium/hydrogen exchanger), member 7 		ENSMUST00000072451 (Slc9a7-001) 20105755-20291807 protein_coding
ENSMUST00000115393 (Slc9a7-002) 20152452-20291770 protein_coding
ENSMUST00000130938 (Slc9a7-003) 20164516-20291807 retained_intron
ENSMUST00000151845 (Slc9a7-004) 20120077-20291786 retained_intron
ENSMUSG00000060090 (Rp2h)
retinitis pigmentosa 2 homolog (human) 		ENSMUST00000033372 (Rp2h-001) 20364481-20400853 protein_coding
ENSMUST00000115387 (Rp2h-002) 20364559-20400853 protein_coding
ENSMUST00000115391 (Rp2h-003) 20364481-20400857 protein_coding
ENSMUST00000133619 (Rp2h-004) 20364619-20405630 nonsense_mediated_decay
ENSMUST00000134349 (Rp2h-005) 20364575-20405653 nonsense_mediated_decay
ENSMUSG00000082855 (Gm14537)
predicted gene 14537 		ENSMUST00000117464 (Gm14537-001) 20391709-20392501 processed_pseudogene
ENSMUSG00000083033 (Gm9083)
predicted gene 9083 		ENSMUST00000120423 (Gm9083-001) 20239469-20240287 processed_pseudogene
ENSMUSG00000084137 (Gm9085)
predicted gene 9085 		ENSMUST00000119994 (Gm9085-001) 20382750-20383821 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005G6_0001ENSG00000065923ENST00000328306ENST00000464933ENST00000489574ENST00000491894ENST00000616978ENSG00000102218ENST00000218340ENSG00000213997ENST00000413837ENSG00000215284ENST00000399931ENSG00000226048ENST00000421881CIL_0005G6_0002ENSMUSG00000037341ENSMUST00000072451ENSMUST00000115393ENSMUST00000130938ENSMUST00000151845ENSMUSG00000060090ENSMUST00000033372ENSMUST00000115387ENSMUST00000115391ENSMUST00000133619ENSMUST00000134349ENSMUSG00000082855ENSMUST00000117464ENSMUSG00000083033ENSMUST00000120423ENSMUSG00000084137ENSMUST00000119994
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005G6_0001ENSG00000065923ENST00000328306ENST00000464933ENST00000616978ENSG00000102218ENST00000218340ENSG00000213997ENST00000413837ENSG00000215284ENST00000399931ENSG00000226048ENST00000421881CIL_0005G6_0002ENSMUSG00000037341ENSMUST00000072451ENSMUST00000115393ENSMUST00000130938ENSMUST00000151845ENSMUSG00000060090ENSMUST00000033372ENSMUST00000115387ENSMUST00000115391ENSMUST00000134349ENSMUSG00000082855ENSMUST00000117464ENSMUSG00000083033ENSMUST00000120423ENSMUSG00000084137ENSMUST00000119994
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065923 ENST00000328306 N/A N/A 1.075±0.00 3.409±0.00 1.258±0.00 N/A N/A 1.773±0.00 0.484±0.00 1.315±0.00 0.870±0.00 N/A N/A N/A
ENST00000464933 N/A N/A N/A N/A N/A N/A 0.684±0.00 3.784±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616978 N/A 0.322±0.00 0.878±0.00 2.323±0.84 0.684±0.07 0.118±0.02 0.522±0.00 N/A 0.614±0.00 0.952±0.00 0.751±0.00 0.608±0.45 0.236±0.15 0.368±0.14
ENSG00000102218 ENST00000218340 3.997±0.00 3.309±0.00 0.551±0.00 0.711±0.29 2.548±0.60 2.384±0.16 0.865±0.53 2.787±0.39 1.785±0.01 2.045±1.00 0.249±0.23 2.808±0.59 8.080±1.83 2.303±0.72
ENSG00000213997 ENST00000413837 N/A 0.592±0.00 N/A 0.085±0.00 0.274±0.16 0.202±0.00 0.047±0.00 0.027±0.00 0.069±0.00 0.775±0.00 N/A 0.327±0.33 N/A 0.099±0.05
ENSG00000215284 ENST00000399931 N/A 0.021±0.00 N/A 0.080±0.04 0.377±0.36 N/A N/A 0.082±0.00 N/A 0.234±0.17 N/A 0.399±0.36 N/A 0.019±0.00
ENSG00000226048 ENST00000421881 N/A N/A N/A 0.018±0.00 0.394±0.00 N/A 0.016±0.00 N/A N/A N/A N/A 0.186±0.12 N/A 0.028±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037341 ENSMUST00000072451 0.383±0.19 2.228±0.57 N/A 1.876±0.00 2.298±0.96 0.415±0.17 0.670±0.19 0.536±0.10 0.187±0.12 0.826±0.49 0.440±0.10 4.750±1.34 0.063±0.02 0.161±0.03
ENSMUST00000115393 0.254±0.00 0.493±0.03 N/A N/A 0.807±0.49 0.238±0.09 0.144±0.00 0.077±0.00 0.258±0.11 0.534±0.00 N/A 1.953±0.19 0.047±0.01 0.065±0.02
ENSMUST00000130938 N/A 1.506±0.05 N/A N/A N/A 0.182±0.01 N/A N/A N/A N/A N/A 1.801±0.28 0.018±0.00 N/A
ENSMUST00000151845 N/A 2.776±1.20 N/A N/A N/A 0.388±0.29 N/A N/A N/A N/A N/A 1.473±0.00 N/A 0.046±0.00
ENSMUSG00000060090 ENSMUST00000033372 1.268±0.69 0.672±0.00 4.153±0.36 1.507±1.00 1.308±0.60 1.382±0.52 0.746±0.12 0.999±0.29 2.610±1.70 1.557±0.16 0.678±0.21 1.713±1.25 2.286±0.95 N/A
ENSMUST00000115387 0.690±0.00 N/A N/A N/A 0.342±0.00 N/A N/A 0.613±0.00 0.653±0.09 1.126±0.27 0.164±0.01 0.647±0.00 N/A N/A
ENSMUST00000115391 3.325±0.95 7.865±1.41 3.465±0.05 1.140±0.00 4.366±1.37 7.756±1.82 1.574±0.41 3.859±0.40 2.121±0.66 6.555±1.11 0.682±0.17 4.516±1.89 3.484±1.03 17.345±3.38
ENSMUST00000133619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134349 0.532±0.00 N/A N/A N/A N/A 1.740±0.00 N/A N/A N/A N/A N/A 5.325±0.00 N/A 4.300±0.26
ENSMUSG00000082855 ENSMUST00000117464 0.087±0.00 0.340±0.02 0.073±0.03 0.157±0.07 N/A N/A N/A 0.093±0.00 0.112±0.04 N/A N/A 0.177±0.12 0.227±0.15 0.312±0.22
ENSMUSG00000083033 ENSMUST00000120423 0.124±0.02 0.068±0.01 0.157±0.00 0.107±0.02 0.285±0.09 0.177±0.15 N/A 0.035±0.00 0.122±0.05 0.047±0.01 0.230±0.05 0.370±0.22 0.071±0.02 0.039±0.00
ENSMUSG00000084137 ENSMUST00000119994 0.051±0.02 N/A 0.020±0.00 0.108±0.05 0.187±0.05 0.151±0.05 0.131±0.00 0.060±0.02 0.048±0.03 0.170±0.06 N/A 0.185±0.01 0.117±0.05 0.292±0.17

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