C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005ME_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163449-ENSG00000079246 CGP 9606 2:216081866-216206303
GeneTranscriptPositionBiotype
ENSG00000079246 (XRCC5)
X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 		ENST00000392132 (XRCC5-201) 216109297-216206291 protein_coding
ENST00000392133 (XRCC5-001) 216107464-216206303 protein_coding
ENST00000417391 (XRCC5-003) 216109351-216119108 protein_coding
ENST00000429133 (XRCC5-005) 216109331-216119139 processed_transcript
ENST00000451695 (XRCC5-006) 216113092-216119165 nonsense_mediated_decay
ENST00000460284 (XRCC5-010) 216116885-216205423 retained_intron
ENST00000471649 (XRCC5-008) 216130710-216141319 processed_transcript
ENST00000476360 (XRCC5-004) 216109342-216117038 retained_intron
ENST00000485763 (XRCC5-009) 216204016-216205422 retained_intron
ENST00000493706 (XRCC5-007) 216125923-216127990 retained_intron
ENSG00000115425 (PECR)
peroxisomal trans-2-enoyl-CoA reductase 		ENST00000265322 (PECR-001) 216038409-216081816 protein_coding
ENST00000442122 (PECR-005) 215996329-216081790 nonsense_mediated_decay
ENST00000461330 (PECR-003) 216039256-216066523 retained_intron
ENST00000464722 (PECR-008) 216065450-216082955 processed_transcript
ENST00000464737 (PECR-002) 216043972-216057947 processed_transcript
ENST00000474093 (PECR-004) 216065210-216081800 retained_intron
ENST00000487318 (PECR-006) 216063889-216081801 processed_transcript
ENST00000497889 (PECR-007) 216049263-216081745 processed_transcript
ENSG00000163449 (TMEM169)
transmembrane protein 169 		ENST00000295658 (TMEM169-001) 216081895-216102783 protein_coding
ENST00000406027 (TMEM169-004) 216081919-216102382 protein_coding
ENST00000433112 (TMEM169-002) 216081866-216099998 protein_coding
ENST00000437356 (TMEM169-003) 216081889-216101065 protein_coding
ENST00000454545 (TMEM169-201) 216081866-216102782 protein_coding
ENST00000455479 (TMEM169-005) 216081919-216099953 protein_coding
ENSG00000232970 (POLHP1)
polymerase (DNA directed), eta pseudogene 1 		ENST00000411806 (POLHP1-001) 216156342-216156811 processed_pseudogene
ENSG00000236478 (AC012513.4)
 ENST00000441511 (AC012513.4-001) 216174896-216176032 processed_pseudogene
CIL_0005ME_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026188-ENSMUSG00000026187 CGP 10090 1:72284369-72394952
GeneTranscriptPositionBiotype
ENSMUSG00000026187 (Xrcc5)
X-ray repair complementing defective repair in Chinese hamster cells 5 		ENSMUST00000027379 (Xrcc5-201) 72307421-72394952 protein_coding
ENSMUSG00000026188 (Tmem169)
transmembrane protein 169 		ENSMUST00000027380 (Tmem169-001) 72284369-72303104 protein_coding
ENSMUST00000141783 (Tmem169-002) 72284395-72300773 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ME_0001ENSG00000079246ENST00000392132ENST00000392133ENST00000417391ENST00000429133ENST00000451695ENST00000460284ENST00000471649ENST00000476360ENST00000485763ENST00000493706ENSG00000115425ENST00000265322ENST00000442122ENST00000461330ENST00000464722ENST00000464737ENST00000474093ENST00000487318ENST00000497889ENSG00000163449ENST00000295658ENST00000406027ENST00000433112ENST00000437356ENST00000454545ENST00000455479ENSG00000232970ENST00000411806ENSG00000236478ENST00000441511CIL_0005ME_0002ENSMUSG00000026187ENSMUST00000027379ENSMUSG00000026188ENSMUST00000027380ENSMUST00000141783
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005ME_0001ENSG00000079246ENST00000392132ENST00000460284ENST00000485763ENSG00000115425ENST00000265322ENST00000442122ENST00000461330ENST00000474093ENSG00000163449ENST00000295658ENST00000406027ENST00000433112ENST00000437356ENST00000454545ENST00000455479ENSG00000232970ENST00000411806ENSG00000236478ENST00000441511CIL_0005ME_0002ENSMUSG00000026187ENSMUST00000027379ENSMUSG00000026188ENSMUST00000027380ENSMUST00000141783
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079246 ENST00000392132 60.228±0.00 58.191±0.00 7.387±0.00 34.204±16.28 25.731±11.53 31.561±18.14 16.554±12.65 29.841±15.03 16.560±1.29 27.648±19.13 24.299±17.41 44.740±16.85 49.814±11.03 63.418±7.68
ENST00000392133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460284 N/A N/A 2.904±0.00 N/A 5.192±0.00 2.366±0.00 1.478±0.00 N/A 3.563±0.00 3.191±0.00 N/A 6.983±0.00 N/A N/A
ENST00000471649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 77.795±0.00 N/A N/A
ENST00000493706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000115425 ENST00000265322 7.307±0.00 0.426±0.00 0.822±0.00 0.969±0.00 9.036±0.00 1.989±0.00 0.170±0.00 11.151±4.98 4.960±4.26 1.092±0.05 0.520±0.00 1.543±0.13 N/A 1.039±0.00
ENST00000442122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A
ENST00000461330 4.337±0.00 N/A N/A 2.632±0.00 10.210±0.00 2.700±0.35 0.864±0.12 N/A 7.691±5.85 N/A 1.808±0.00 2.188±0.00 N/A N/A
ENST00000464722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474093 N/A N/A N/A N/A N/A 5.564±0.00 N/A 25.974±0.00 N/A N/A 1.031±0.00 1.473±0.00 N/A N/A
ENST00000487318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163449 ENST00000295658 0.141±0.00 0.202±0.00 N/A 0.641±0.05 0.311±0.13 0.122±0.09 0.106±0.00 0.271±0.00 0.107±0.04 0.109±0.00 N/A 0.143±0.06 0.061±0.00 0.108±0.00
ENST00000406027 N/A 0.064±0.00 0.116±0.00 0.267±0.00 N/A N/A 0.008±0.00 N/A N/A 0.066±0.00 0.004±0.00 0.040±0.03 N/A 0.049±0.00
ENST00000433112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A
ENST00000437356 0.155±0.00 N/A 0.450±0.00 0.738±0.19 N/A 0.150±0.00 N/A N/A N/A 0.755±0.00 N/A N/A N/A N/A
ENST00000454545 N/A N/A N/A 0.312±0.00 N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A 0.193±0.00
ENST00000455479 N/A N/A 0.325±0.00 N/A 0.374±0.00 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000232970 ENST00000411806 N/A N/A 0.656±0.00 0.144±0.00 N/A N/A 0.026±0.00 0.028±0.00 N/A N/A N/A 0.282±0.00 N/A 0.041±0.01
ENSG00000236478 ENST00000441511 0.010±0.00 N/A 0.224±0.00 0.040±0.00 0.106±0.00 0.039±0.00 0.067±0.06 0.111±0.04 N/A N/A N/A 0.070±0.00 N/A 0.029±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026187 ENSMUST00000027379 2.493±1.38 0.712±0.33 8.748±0.53 4.420±0.84 1.425±0.52 1.604±0.33 2.140±0.17 7.513±0.29 5.227±2.92 2.734±0.32 7.829±1.43 4.481±4.33 8.621±4.93 2.744±0.77
ENSMUSG00000026188 ENSMUST00000027380 0.109±0.07 0.218±0.09 0.072±0.00 7.657±4.61 0.033±0.02 0.193±0.10 0.034±0.02 1.185±0.60 0.184±0.12 0.033±0.01 0.028±0.01 0.313±0.16 0.351±0.23 0.085±0.02
ENSMUST00000141783 N/A N/A N/A 3.584±0.00 N/A N/A 0.051±0.00 N/A 0.148±0.09 N/A N/A 0.380±0.15 0.215±0.13 0.432±0.00

Loading