C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16148
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119653 Gm16148-001 ENSMUSG00000082605 10090 - 10:3946199-3947091 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119653
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119653 0.323±0.11 0.342±0.01 0.147±0.00 0.119±0.04 0.445±0.23 0.294±0.11 0.290±0.10 0.197±0.08 0.053±0.03 0.506±0.18 0.078±0.00 0.382±0.18 0.185±0.08 0.108±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OK CIL_0005OK_0002 CGP 10:3540240-3967303
CIL_0005ED CIL_0005ED_0002 CGP 10:3740364-4167081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 656
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 715
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 660
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 691
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 586
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 593
ENST00000454851 AC005105.2-001 processed_pseudogene Homo_sapiens 6e-24 115
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 610
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 675
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 566
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 662
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 590
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 658
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 675

Loading