C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005XQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145833-ENSG00000181904 CGP 9606 5:134758779-134859737
GeneTranscriptPositionBiotype
ENSG00000145833 (DDX46)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 		ENST00000354283 (DDX46-002) 134758804-134829296 protein_coding
ENST00000452510 (DDX46-001) 134758781-134831138 protein_coding
ENST00000503946 (DDX46-003) 134790153-134829932 retained_intron
ENST00000505592 (DDX46-010) 134781141-134784693 retained_intron
ENST00000506332 (DDX46-004) 134825813-134829039 retained_intron
ENST00000507053 (DDX46-006) 134818916-134855133 nonsense_mediated_decay
ENST00000507392 (DDX46-005) 134758779-134829039 nonsense_mediated_decay
ENST00000509178 (DDX46-011) 134782070-134794968 processed_transcript
ENST00000509255 (DDX46-007) 134773785-134777894 retained_intron
ENST00000513592 (DDX46-009) 134782051-134794924 nonsense_mediated_decay
ENST00000513987 (DDX46-008) 134780736-134781952 retained_intron
ENSG00000181904 (C5orf24)
chromosome 5 open reading frame 24 		ENST00000338051 (C5orf24-002) 134845680-134859109 protein_coding
ENST00000394976 (C5orf24-001) 134845988-134859737 protein_coding
ENST00000435259 (C5orf24-004) 134846154-134855488 protein_coding
ENST00000504727 (C5orf24-003) 134846096-134859732 protein_coding
ENST00000507390 (C5orf24-006) 134854950-134857412 protein_coding
ENST00000508791 (C5orf24-005) 134846246-134854922 protein_coding
ENSG00000241179 (CTB-2L9.1)
 ENST00000473936 (CTB-2L9.1-001) 134804778-134805132 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005XQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021500-ENSMUSG00000045767 CGP 10090 13:55635027-55703499
GeneTranscriptPositionBiotype
ENSMUSG00000021500 (Ddx46)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 		ENSMUST00000099479 (Ddx46-201) 55635027-55681256 protein_coding
ENSMUST00000172272 (Ddx46-202) 55635027-55681256 protein_coding
ENSMUSG00000045767 (B230219D22Rik)
RIKEN cDNA B230219D22 gene 		ENSMUST00000057844 (B230219D22Rik-201) 55693124-55703499 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XQ_0001ENSG00000145833ENST00000354283ENST00000452510ENST00000503946ENST00000505592ENST00000506332ENST00000507053ENST00000507392ENST00000509178ENST00000509255ENST00000513592ENST00000513987ENSG00000181904ENST00000338051ENST00000394976ENST00000435259ENST00000504727ENST00000507390ENST00000508791ENSG00000241179ENST00000473936CIL_0005XQ_0002ENSMUSG00000021500ENSMUST00000099479ENSMUST00000172272ENSMUSG00000045767ENSMUST00000057844
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005XQ_0001ENSG00000145833ENST00000354283ENST00000452510ENST00000507392ENSG00000181904ENST00000338051ENST00000394976ENST00000435259ENST00000504727ENSG00000241179ENST00000473936CIL_0005XQ_0002ENSMUSG00000021500ENSMUST00000099479ENSMUST00000172272ENSMUSG00000045767ENSMUST00000057844
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145833 ENST00000354283 N/A 6.002±0.00 2.177±0.00 3.740±2.20 3.486±0.20 4.915±1.46 4.494±0.00 5.088±1.53 2.327±0.37 3.362±1.30 4.123±2.67 8.748±5.12 7.956±5.02 17.592±8.94
ENST00000452510 N/A 2.643±0.00 N/A 0.666±0.00 N/A N/A 1.276±0.00 N/A N/A N/A 1.439±0.00 1.840±0.00 N/A N/A
ENST00000503946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507392 N/A N/A N/A 4.012±0.00 4.555±0.00 5.029±0.00 2.482±0.00 N/A N/A 1.537±0.00 3.481±0.00 1.931±0.00 N/A 7.501±0.00
ENST00000509178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181904 ENST00000338051 N/A N/A 4.355±0.00 2.163±0.00 3.414±0.00 2.452±0.00 0.751±0.00 3.891±0.00 4.431±0.00 N/A N/A 3.241±0.00 N/A N/A
ENST00000394976 4.737±0.00 N/A N/A 4.047±1.23 3.305±0.31 3.583±1.39 2.072±1.38 2.844±0.33 2.947±0.83 3.230±1.16 0.576±0.00 3.157±0.40 3.151±1.11 3.974±0.00
ENST00000435259 N/A N/A 6.762±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504727 4.774±0.00 4.205±0.00 N/A 5.942±0.00 2.793±0.00 5.369±0.00 2.084±0.00 10.170±0.00 4.774±0.00 4.442±0.00 2.902±0.00 4.752±0.35 2.716±0.37 5.185±0.00
ENST00000507390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241179 ENST00000473936 N/A 0.130±0.00 N/A 0.033±0.00 N/A N/A 0.061±0.00 N/A 0.028±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021500 ENSMUST00000099479 N/A 7.876±1.48 N/A N/A N/A 1.070±0.00 N/A N/A N/A N/A N/A N/A N/A 31.964±0.00
ENSMUST00000172272 7.593±3.59 11.811±1.95 11.142±0.65 9.961±3.14 9.293±4.07 6.238±1.96 4.729±0.21 7.565±1.35 8.034±5.30 7.449±1.32 6.580±0.54 11.060±2.52 11.842±5.49 23.741±15.40
ENSMUSG00000045767 ENSMUST00000057844 25.263±8.03 43.551±2.29 31.442±3.60 27.456±12.63 24.363±6.19 21.276±2.68 15.824±1.69 22.530±1.34 14.650±3.12 41.837±3.12 8.908±0.39 36.088±12.35 8.858±5.73 4.083±1.77

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