C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Y8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204952-ENSG00000161381 CGP 9606 17:38936432-39154394
GeneTranscriptPositionBiotype
ENSG00000161381 (PLXDC1)
plexin domain containing 1 		ENST00000315392 (PLXDC1-001) 39063303-39151649 protein_coding
ENST00000394318 (PLXDC1-009) 39067130-39151519 retained_intron
ENST00000415163 (PLXDC1-004) 39108123-39152571 protein_coding
ENST00000441877 (PLXDC1-003) 39087629-39152612 protein_coding
ENST00000444435 (PLXDC1-006) 39096868-39107468 processed_transcript
ENST00000444911 (PLXDC1-008) 39067160-39152699 protein_coding
ENST00000461225 (PLXDC1-002) 39067132-39153232 retained_intron
ENST00000493200 (PLXDC1-005) 39067132-39132037 processed_transcript
ENST00000577838 (PLXDC1-015) 39107407-39112177 processed_transcript
ENST00000577941 (PLXDC1-014) 39109248-39153033 processed_transcript
ENST00000578277 (PLXDC1-018) 39067922-39070471 retained_intron
ENST00000578390 (PLXDC1-010) 39067130-39151519 nonsense_mediated_decay
ENST00000578517 (PLXDC1-007) 39067130-39153027 retained_intron
ENST00000578808 (PLXDC1-013) 39087608-39153032 nonsense_mediated_decay
ENST00000579190 (PLXDC1-011) 39108202-39154394 protein_coding
ENST00000579279 (PLXDC1-020) 39077949-39107487 protein_coding
ENST00000579417 (PLXDC1-017) 39072014-39078008 retained_intron
ENST00000580667 (PLXDC1-019) 39108715-39153050 processed_transcript
ENST00000582025 (PLXDC1-016) 39069981-39079270 retained_intron
ENST00000583285 (PLXDC1-012) 39126939-39153050 processed_transcript
ENSG00000204952 (FBXO47)
F-box protein 47 		ENST00000378079 (FBXO47-001) 38936432-38967402 protein_coding
ENSG00000214553 (LRRC37A11P)
leucine rich repeat containing 37, member A11, pseudogene 		ENST00000425901 (LRRC37A11P-002) 39029906-39053205 processed_transcript
ENST00000579258 (LRRC37A11P-001) 39027277-39045347 transcribed_unprocessed_pseudogene
ENSG00000266013 (CTD-2206N4.2)
 ENST00000582518 (CTD-2206N4.2-001) 39026715-39027110 lincRNA
ENSG00000266048 (CTD-2206N4.1)
 ENST00000584401 (CTD-2206N4.1-001) 39033926-39034042 processed_pseudogene
ENSG00000266588 (RP1-56K13.5)
 ENST00000577621 (RP1-56K13.5-001) 39009292-39013031 lincRNA
ENST00000583161 (RP1-56K13.5-002) 39003248-39013032 lincRNA
ENSG00000277021 (AC091178.2)
 ENST00000610610 (AC091178.2-201) 39047468-39047576 miRNA
ENSG00000277426 (CTD-2206N4.5)
 ENST00000612680 (CTD-2206N4.5-001) 39023394-39026742 unprocessed_pseudogene
CIL_0005Y8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070336-ENSMUSG00000017417 CGP 10090 11:97853826-97986444
GeneTranscriptPositionBiotype
ENSMUSG00000017417 (Plxdc1)
plexin domain containing 1 		ENSMUST00000017561 (Plxdc1-001) 97923238-97986444 protein_coding
ENSMUST00000107564 (Plxdc1-004) 97978256-97986430 protein_coding
ENSMUST00000107565 (Plxdc1-003) 97923656-97986399 protein_coding
ENSMUST00000141708 (Plxdc1-002) 97936843-97986433 processed_transcript
ENSMUSG00000070336 (Fbxo47)
F-box protein 47 		ENSMUST00000093939 (Fbxo47-001) 97853826-97884154 protein_coding
ENSMUST00000125403 (Fbxo47-002) 97853826-97855552 retained_intron
ENSMUSG00000082715 (Gm11633)
predicted gene 11633 		ENSMUST00000118176 (Gm11633-001) 97968792-97969235 processed_pseudogene
ENSMUSG00000086917 (Gm11630)
predicted gene 11630 		ENSMUST00000152825 (Gm11630-001) 97884594-97893811 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y8_0001ENSG00000161381ENST00000315392ENST00000394318ENST00000415163ENST00000441877ENST00000444435ENST00000444911ENST00000461225ENST00000493200ENST00000577838ENST00000577941ENST00000578277ENST00000578390ENST00000578517ENST00000578808ENST00000579190ENST00000579279ENST00000579417ENST00000580667ENST00000582025ENST00000583285ENSG00000204952ENST00000378079ENSG00000214553ENST00000425901ENST00000579258ENSG00000266013ENST00000582518ENSG00000266048ENST00000584401ENSG00000266588ENST00000577621ENST00000583161ENSG00000277021ENST00000610610ENSG00000277426ENST00000612680CIL_0005Y8_0002ENSMUSG00000017417ENSMUST00000017561ENSMUST00000107564ENSMUST00000107565ENSMUST00000141708ENSMUSG00000070336ENSMUST00000093939ENSMUST00000125403ENSMUSG00000082715ENSMUST00000118176ENSMUSG00000086917ENSMUST00000152825
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y8_0001ENSG00000161381ENST00000315392ENST00000394318ENST00000441877ENST00000444435ENST00000444911ENST00000577838ENST00000578517ENST00000579279ENST00000582025ENSG00000204952ENST00000378079ENSG00000214553ENST00000425901ENST00000579258ENSG00000266013ENST00000582518ENSG00000266048ENST00000584401ENSG00000266588ENST00000577621ENST00000583161ENSG00000277021ENST00000610610ENSG00000277426ENST00000612680CIL_0005Y8_0002ENSMUSG00000017417ENSMUST00000017561ENSMUST00000107564ENSMUST00000107565ENSMUSG00000070336ENSMUST00000093939ENSMUST00000125403ENSMUSG00000082715ENSMUST00000118176ENSMUSG00000086917ENSMUST00000152825
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000161381 ENST00000315392 0.170±0.00 0.354±0.00 N/A 1.593±0.00 0.466±0.00 1.045±0.00 1.469±0.00 0.116±0.00 N/A N/A 0.136±0.00 0.170±0.00 0.309±0.11 N/A
ENST00000394318 0.238±0.00 1.915±0.00 0.451±0.00 N/A 1.402±0.00 1.295±0.00 1.655±0.00 0.782±0.00 N/A N/A N/A 4.527±1.89 1.923±1.28 0.644±0.00
ENST00000415163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.369±0.00 N/A N/A
ENST00000444435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.037±0.00 N/A N/A N/A
ENST00000444911 0.435±0.00 1.810±0.00 N/A 3.051±1.10 1.755±0.17 2.262±1.48 2.078±1.22 0.687±0.00 0.452±0.00 3.348±0.00 0.495±0.10 5.136±2.04 2.493±0.12 7.343±6.38
ENST00000461225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.373±0.00 N/A N/A N/A
ENST00000577941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578517 N/A N/A N/A 0.487±0.00 N/A N/A N/A N/A N/A 0.497±0.00 N/A N/A N/A N/A
ENST00000578808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579279 N/A N/A N/A N/A 5.637±0.00 N/A N/A N/A N/A N/A 2.401±0.00 N/A N/A N/A
ENST00000579417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582025 1.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204952 ENST00000378079 N/A N/A N/A 0.013±0.00 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.412±1.20
ENSG00000214553 ENST00000425901 0.021±0.00 0.044±0.00 0.089±0.00 0.065±0.00 0.013±0.00 N/A 0.034±0.00 0.009±0.00 0.011±0.00 0.016±0.00 N/A 0.018±0.01 0.013±0.00 0.623±0.21
ENST00000579258 N/A 0.030±0.00 N/A N/A 0.004±0.00 0.008±0.00 0.005±0.00 N/A 0.007±0.00 N/A N/A N/A N/A 0.108±0.00
ENSG00000266013 ENST00000582518 0.044±0.00 0.226±0.00 N/A 0.046±0.00 N/A N/A 0.161±0.00 0.333±0.00 0.151±0.00 N/A N/A 0.274±0.00 0.138±0.00 0.231±0.09
ENSG00000266048 ENST00000584401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.900±0.00 N/A N/A
ENSG00000266588 ENST00000577621 N/A N/A 0.144±0.00 0.315±0.00 0.260±0.00 N/A 0.260±0.00 0.537±0.00 0.005±0.00 N/A N/A N/A N/A 0.178±0.05
ENST00000583161 N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A 0.026±0.00 0.280±0.00 N/A N/A 0.030±0.00 0.194±0.00
ENSG00000277021 ENST00000610610 0.240±0.00 2.018±0.00 N/A 1.684±0.00 1.081±0.00 0.240±0.00 1.469±0.00 0.270±0.00 1.521±0.00 N/A N/A 0.622±0.00 N/A 2.584±0.00
ENSG00000277426 ENST00000612680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017417 ENSMUST00000017561 1.928±0.76 3.585±1.00 2.055±0.26 0.623±0.61 1.775±0.58 0.902±0.22 2.014±0.51 0.331±0.09 0.294±0.16 8.113±1.52 1.453±0.45 3.227±1.47 0.238±0.26 8.411±6.76
ENSMUST00000107564 N/A 5.727±2.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.464±1.02 N/A N/A
ENSMUST00000107565 0.593±0.32 1.946±0.48 N/A 1.495±0.00 0.829±0.37 0.475±0.05 0.896±0.12 0.100±0.05 0.125±0.04 2.257±0.09 0.307±0.00 1.202±0.48 0.062±0.04 7.601±5.96
ENSMUST00000141708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070336 ENSMUST00000093939 0.151±0.07 0.075±0.00 0.057±0.03 0.159±0.02 0.153±0.03 0.084±0.00 0.097±0.05 0.114±0.04 0.092±0.04 0.133±0.01 0.079±0.03 0.202±0.06 0.154±0.09 1.357±0.43
ENSMUST00000125403 0.186±0.09 0.299±0.14 N/A 0.131±0.07 0.347±0.11 0.164±0.10 0.082±0.01 0.168±0.06 0.108±0.07 0.076±0.04 0.093±0.04 0.263±0.11 0.366±0.03 9.168±4.14
ENSMUSG00000082715 ENSMUST00000118176 0.249±0.10 N/A 0.029±0.00 N/A 0.370±0.26 N/A N/A N/A N/A 0.491±0.12 N/A 0.159±0.01 N/A 0.426±0.08
ENSMUSG00000086917 ENSMUST00000152825 0.220±0.06 0.554±0.00 0.253±0.00 0.398±0.00 0.268±0.06 0.394±0.02 0.151±0.01 0.267±0.01 0.184±0.17 N/A 0.186±0.00 0.496±0.39 0.494±0.06 0.594±0.52

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