C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315392 PLXDC1-001 ENSG00000161381 9606 - 17:39063303-39151649 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaENST00000315392
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta
ENST00000315392 0.170±0.00 0.354±0.00 1.593±0.00 0.466±0.00 1.045±0.00 1.469±0.00 0.116±0.00 0.136±0.00 0.170±0.00 0.309±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y8 CIL_0005Y8_0001 CGP 17:38936432-39154394
CIL_0006QJ CIL_0006QJ_0001 CGP 17:39063303-39167484

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 NAS angiogenesis
GO:0004872 IEA receptor activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005615 NAS extracellular space
GO:0005622 NAS intracellular
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0007275 IEA multicellular organismal development
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0021510 IEA spinal cord development
GO:0030425 IEA dendrite
GO:0043025 IEA neuronal cell body
GO:0043235 IDA receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017561 Plxdc1-001 protein_coding Mus_musculus 0 1434
ENSMUST00000107565 Plxdc1-003 protein_coding Mus_musculus 0 1341
ENSMUST00000141708 Plxdc1-002 processed_transcript Mus_musculus 0 313

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