C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 259
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356663 TMEM259-001 ENSG00000182087 9606 - 19:1009648-1021179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356663 23.260±0.00 24.300±0.00 2.724±0.00 10.535±5.41 13.050±9.71 8.382±4.43 9.026±6.66 33.338±19.79 16.155±12.75 29.931±0.00 12.124±8.70 28.911±22.97 38.436±19.54 27.215±5.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0005ZM CIL_0005ZM_0002 CGP 19:984271-1009732
CIL_0005ZF CIL_0005ZF_0002 CGP 19:1000419-1021179
CIL_0000I1 CIL_0000I1_0001 CGP 19:1009648-1039068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052885 Tmem259-001 protein_coding Mus_musculus 0 1676
ENSMUST00000124536 Tmem259-002 protein_coding Mus_musculus 0 904
ENSMUST00000126383 Tmem259-003 retained_intron Mus_musculus 0 566
ENSMUST00000132080 Tmem259-004 retained_intron Mus_musculus 0 501
ENSMUST00000124889 Tmem259-005 retained_intron Mus_musculus 1e-36 159

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