C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 259
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124536 Tmem259-002 ENSMUSG00000013858 10090 - 10:79977358-79984040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000124536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000124536 23.673±2.98 89.678±22.26 26.228±1.92 30.755±22.43 48.720±28.13 69.027±12.24 19.052±1.69 32.413±6.06 35.422±11.03 39.672±11.37 8.305±0.66 50.056±16.35 24.921±13.85 20.527±9.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0005ZM CIL_0005ZM_0003 CGP 10:79960152-79977190
CIL_0005ZF CIL_0005ZF_0003 CGP 10:79970715-79984330
CIL_0000I1 CIL_0000I1_0002 CGP 10:79974948-79996062

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333175 TMEM259-002 protein_coding Homo_sapiens 0 904
ENST00000356663 TMEM259-001 protein_coding Homo_sapiens 0 904
ENST00000586285 TMEM259-014 protein_coding Homo_sapiens 0 582
ENST00000586704 TMEM259-009 retained_intron Homo_sapiens 0 324
ENST00000589055 TMEM259-013 retained_intron Homo_sapiens 0 267
ENST00000592052 TMEM259-011 retained_intron Homo_sapiens 0 239
ENST00000592590 TMEM259-008 protein_coding Homo_sapiens 0 743
ENST00000592618 TMEM259-012 retained_intron Homo_sapiens 0 752
ENST00000593068 TMEM259-003 nonsense_mediated_decay Homo_sapiens 0 324

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