C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 259
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593068 TMEM259-003 ENSG00000182087 9606 - 19:1009648-1013242 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonTestisENST00000593068
Transcript ID Adipose Adrenal Breast Colon Testis
ENST00000593068 18.389±0.00 23.556±0.00 14.910±0.00 10.767±0.00 24.834±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0001 VISTA 19:477571-1083531
CIL_0005ZM CIL_0005ZM_0002 CGP 19:984271-1009732
CIL_0005ZF CIL_0005ZF_0002 CGP 19:1000419-1021179
CIL_0000I1 CIL_0000I1_0001 CGP 19:1009648-1039068

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052885 Tmem259-001 protein_coding Mus_musculus 0 824
ENSMUST00000132080 Tmem259-004 retained_intron Mus_musculus 0 503
ENSMUST00000124536 Tmem259-002 protein_coding Mus_musculus 0 324
ENSMUST00000126383 Tmem259-003 retained_intron Mus_musculus 0 237
ENSMUST00000124889 Tmem259-005 retained_intron Mus_musculus 2e-33 148

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