C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9522
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182394 Gm9522-001 ENSMUSG00000098021 10090 + 15:39180511-39181441 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182394
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182394 1.355±0.94 0.550±0.38 0.440±0.13 0.253±0.20 0.063±0.03 0.376±0.18 0.168±0.02 0.050±0.03 1.553±1.22 0.921±0.80 1.305±0.71 0.860±0.59 0.733±0.47 0.170±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060F CIL_00060F_0002 CGP 15:39112865-39681940

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 459
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 1.96182e-44 183
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 459
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 459
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 459
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 459
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 372
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 516
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 381
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 248
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 191
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 233
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 357
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 300
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 387
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 246
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 267
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 276
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 326
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 3.99931e-42 176
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 7e-25 115
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 2e-39 167
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 1e-35 154
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 459
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 459
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 459
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 230
ENST00000489113 GAPDHP47-001 processed_pseudogene Homo_sapiens 0 241
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 230
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 289
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 316
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 289
ENST00000508195 RP11-616K22.1-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 228
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 278
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 195
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 390
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 243
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 189
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 459

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