C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00061P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134086-ENSG00000134070 CGP 9606 3:10141008-10243743
GeneTranscriptPositionBiotype
ENSG00000134070 (IRAK2)
interleukin-1 receptor-associated kinase 2
ENST00000256458 (IRAK2-001) 10164865-10243743 protein_coding
ENSG00000134086 (VHL)
von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
ENST00000256474 (VHL-001) 10141008-10152220 protein_coding
ENST00000345392 (VHL-002) 10141788-10152082 protein_coding
ENST00000477538 (VHL-003) 10142546-10150145 processed_transcript
CIL_00061P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033933-ENSMUSG00000060477 CGP 10090 6:113623959-113695009
GeneTranscriptPositionBiotype
ENSMUSG00000033933 (Vhl)
von Hippel-Lindau tumor suppressor
ENSMUST00000035673 (Vhl-001) 113623959-113631633 protein_coding
ENSMUST00000128770 (Vhl-002) 113624721-113629761 processed_transcript
ENSMUST00000131819 (Vhl-003) 113624929-113629557 processed_transcript
ENSMUSG00000060477 (Irak2)
interleukin-1 receptor-associated kinase 2
ENSMUST00000059286 (Irak2-001) 113638467-113695009 protein_coding
ENSMUST00000089022 (Irak2-004) 113638528-113695009 protein_coding
ENSMUST00000089023 (Irak2-002) 113638488-113693798 protein_coding
ENSMUST00000113024 (Irak2-005) 113669778-113693798 protein_coding
ENSMUST00000143948 (Irak2-007) 113692759-113694007 processed_transcript
ENSMUST00000155554 (Irak2-006) 113668850-113672939 protein_coding
ENSMUSG00000097671 (1700015O11Rik)
RIKEN cDNA 1700015O11 gene
ENSMUST00000180964 (1700015O11Rik-201) 113631645-113633144 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061P_0001ENSG00000134070ENST00000256458ENSG00000134086ENST00000256474ENST00000345392ENST00000477538CIL_00061P_0002ENSMUSG00000033933ENSMUST00000035673ENSMUST00000128770ENSMUST00000131819ENSMUSG00000060477ENSMUST00000059286ENSMUST00000089022ENSMUST00000089023ENSMUST00000113024ENSMUST00000143948ENSMUST00000155554ENSMUSG00000097671ENSMUST00000180964
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00061P_0001ENSG00000134070ENST00000256458ENSG00000134086ENST00000256474ENST00000345392ENST00000477538CIL_00061P_0002ENSMUSG00000033933ENSMUST00000035673ENSMUST00000128770ENSMUST00000131819ENSMUSG00000060477ENSMUST00000059286ENSMUST00000089022ENSMUST00000089023ENSMUST00000113024ENSMUSG00000097671ENSMUST00000180964
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134070 ENST00000256458 7.531±0.00 2.020±0.00 0.763±0.00 1.371±0.95 1.129±0.38 0.989±0.77 0.456±0.22 1.470±0.00 1.493±0.00 10.694±9.94 6.525±6.01 2.156±1.29 0.664±0.16 0.631±0.55
ENSG00000134086 ENST00000256474 N/A N/A N/A 0.944±0.00 1.429±0.00 1.375±0.00 N/A 0.926±0.00 1.395±0.00 0.502±0.00 N/A 1.916±1.36 0.827±0.00 N/A
ENST00000345392 8.450±0.00 12.538±0.00 1.866±0.00 3.534±0.79 3.984±1.57 1.876±0.52 1.458±0.87 4.874±0.00 2.020±1.04 3.367±1.21 1.193±0.92 3.540±1.18 4.161±2.07 7.019±0.82
ENST00000477538 N/A N/A 1.703±0.00 2.463±0.00 3.065±0.00 N/A N/A N/A 1.471±0.00 3.557±0.28 0.517±0.00 2.026±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033933 ENSMUST00000035673 11.659±0.66 18.281±2.14 7.002±0.27 12.049±6.44 10.254±4.38 7.780±1.05 2.865±0.42 7.723±0.31 4.250±0.45 9.642±0.29 1.747±0.72 12.803±5.32 11.673±6.45 15.192±9.25
ENSMUST00000128770 N/A N/A N/A 10.044±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.073±7.43
ENSMUST00000131819 N/A N/A N/A N/A 16.354±0.00 N/A N/A N/A 4.918±0.34 N/A N/A 14.578±0.00 21.530±0.00 61.247±1.70
ENSMUSG00000060477 ENSMUST00000059286 14.744±7.16 3.835±1.45 8.739±1.64 0.502±0.00 6.792±4.25 10.600±3.48 2.284±0.63 11.145±1.29 4.171±1.13 10.042±0.69 0.822±0.31 4.406±1.77 5.627±1.83 0.475±0.17
ENSMUST00000089022 3.968±2.03 1.445±0.16 7.866±1.19 0.662±0.47 4.928±1.23 6.122±1.31 0.832±0.08 3.450±0.28 2.618±1.32 4.002±0.65 0.706±0.13 1.690±0.86 6.076±3.76 0.232±0.00
ENSMUST00000089023 N/A 2.306±0.87 N/A N/A 3.797±0.00 4.147±0.00 N/A N/A 2.034±0.00 3.378±0.00 N/A 2.061±0.53 N/A N/A
ENSMUST00000113024 N/A 1.239±0.26 N/A N/A 3.350±0.72 4.085±0.36 N/A N/A 1.273±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097671 ENSMUST00000180964 N/A 0.137±0.00 N/A 0.013±0.00 N/A 0.226±0.00 N/A N/A 0.141±0.00 0.072±0.00 N/A N/A 0.126±0.10 0.724±0.00

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