C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006GJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127511-ENSG00000127533 CGP 9606 19:16829400-16892606
GeneTranscriptPositionBiotype
ENSG00000127511 (SIN3B)
SIN3 transcription regulator family member B 		ENST00000248054 (SIN3B-001) 16829400-16880350 protein_coding
ENST00000379803 (SIN3B-003) 16829407-16880353 protein_coding
ENST00000594235 (SIN3B-005) 16877162-16878942 processed_transcript
ENST00000594372 (SIN3B-008) 16865122-16869623 retained_intron
ENST00000595049 (SIN3B-010) 16875931-16878706 retained_intron
ENST00000595541 (SIN3B-004) 16863274-16878961 protein_coding
ENST00000595900 (SIN3B-012) 16869882-16872666 processed_transcript
ENST00000596638 (SIN3B-006) 16841952-16863286 protein_coding
ENST00000596802 (SIN3B-002) 16829407-16855745 protein_coding
ENST00000599880 (SIN3B-007) 16863097-16865590 processed_transcript
ENST00000601141 (SIN3B-011) 16876939-16879060 retained_intron
ENST00000602204 (SIN3B-009) 16869969-16871638 retained_intron
ENSG00000127533 (F2RL3)
coagulation factor II (thrombin) receptor-like 3 		ENST00000248076 (F2RL3-001) 16888860-16892606 protein_coding
ENST00000599210 (F2RL3-003) 16889190-16890080 protein_coding
ENSG00000268743 (CTD-2538G9.5)
 ENST00000600987 (CTD-2538G9.5-001) 16844025-16846473 sense_intronic
CIL_0006GJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031622-ENSMUSG00000050147 CGP 10090 8:72723288-72763874
GeneTranscriptPositionBiotype
ENSMUSG00000031622 (Sin3b)
transcriptional regulator, SIN3B (yeast) 		ENSMUST00000004494 (Sin3b-201) 72723288-72758203 protein_coding
ENSMUST00000109950 (Sin3b-202) 72723288-72739910 protein_coding
ENSMUSG00000050147 (F2rl3)
coagulation factor II (thrombin) receptor-like 3 		ENSMUST00000058099 (F2rl3-201) 72761880-72763874 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GJ_0001ENSG00000127511ENST00000248054ENST00000379803ENST00000594235ENST00000594372ENST00000595049ENST00000595541ENST00000595900ENST00000596638ENST00000596802ENST00000599880ENST00000601141ENST00000602204ENSG00000127533ENST00000248076ENST00000599210ENSG00000268743ENST00000600987CIL_0006GJ_0002ENSMUSG00000031622ENSMUST00000004494ENSMUST00000109950ENSMUSG00000050147ENSMUST00000058099
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006GJ_0001ENSG00000127511ENST00000248054ENST00000379803ENST00000594372ENST00000595049ENST00000595541ENST00000596802ENSG00000127533ENST00000248076ENSG00000268743ENST00000600987CIL_0006GJ_0002ENSMUSG00000031622ENSMUST00000004494ENSMUST00000109950ENSMUSG00000050147ENSMUST00000058099
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127511 ENST00000248054 10.011±0.00 7.209±0.00 1.184±0.00 5.042±4.20 4.713±0.00 8.743±0.00 2.171±1.90 3.328±2.90 1.164±0.00 7.808±6.36 3.850±0.00 13.689±5.61 12.606±1.00 20.049±3.50
ENST00000379803 N/A N/A N/A 4.613±0.00 N/A N/A N/A N/A 0.348±0.00 N/A 1.538±0.93 N/A 2.794±0.00 N/A
ENST00000594235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.277±0.00 N/A N/A N/A
ENST00000595049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.098±0.00 19.185±0.00 33.398±0.00
ENST00000595541 N/A N/A 0.780±0.00 N/A 1.077±0.00 N/A 0.666±0.00 0.656±0.00 N/A N/A N/A 3.188±0.00 5.702±0.00 11.050±0.00
ENST00000595900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596802 N/A N/A N/A N/A N/A N/A 2.109±0.00 1.255±0.65 0.860±0.00 N/A N/A N/A N/A N/A
ENST00000599880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000127533 ENST00000248076 159.308±0.00 1.027±0.00 0.063±0.00 0.227±0.00 0.753±0.00 3.514±3.27 0.094±0.00 2.530±0.00 0.076±0.00 1.819±0.76 N/A 0.530±0.33 1.924±0.71 1.083±0.00
ENST00000599210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000268743 ENST00000600987 0.310±0.00 1.021±0.00 N/A 0.310±0.00 0.893±0.00 0.123±0.00 0.062±0.00 0.267±0.00 N/A N/A 0.901±0.00 0.391±0.22 0.353±0.14 0.630±0.45
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031622 ENSMUST00000004494 10.007±1.78 17.143±0.55 10.675±0.49 22.327±6.75 8.258±2.79 10.674±2.40 4.122±0.85 7.715±0.64 3.617±0.74 11.878±1.53 2.439±0.24 20.637±8.28 43.166±26.64 8.847±0.33
ENSMUST00000109950 51.785±17.41 109.187±23.49 40.429±6.56 44.778±4.28 48.453±2.62 30.141±12.80 29.834±4.26 52.571±3.70 34.965±10.83 20.161±8.86 11.556±1.00 73.591±21.57 758.729±379.11 163.133±36.24
ENSMUSG00000050147 ENSMUST00000058099 2.223±0.63 5.213±1.07 0.346±0.04 0.338±0.16 3.647±1.90 3.299±0.43 0.645±0.31 0.962±0.12 1.645±1.50 0.872±0.18 1.147±0.23 2.833±1.17 3.097±1.21 0.164±0.05

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