C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SIN3 transcription regulator family member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000248054 SIN3B-001 ENSG00000127511 9606 + 19:16829400-16880350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248054 10.011±0.00 7.209±0.00 1.184±0.00 5.042±4.20 4.713±0.00 8.743±0.00 2.171±1.90 3.328±2.90 1.164±0.00 7.808±6.36 3.850±0.00 13.689±5.61 12.606±1.00 20.049±3.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G2 CIL_0006G2_0001 CGP 19:16719976-16880353
CIL_0006GJ CIL_0006GJ_0001 CGP 19:16829400-16892606

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISS:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004494 Sin3b-201 protein_coding Mus_musculus 0 2152
ENSMUST00000109950 Sin3b-202 protein_coding Mus_musculus 0 817

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