C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166073-ENSG00000128829 CGP 9606 15:39799023-40035591
GeneTranscriptPositionBiotype
ENSG00000128829 (EIF2AK4)
eukaryotic translation initiation factor 2 alpha kinase 4 		ENST00000263791 (EIF2AK4-001) 39934153-40035590 protein_coding
ENST00000558557 (EIF2AK4-005) 40002391-40035591 retained_intron
ENST00000558629 (EIF2AK4-004) 39991166-40035591 retained_intron
ENST00000558743 (EIF2AK4-007) 40020526-40022597 retained_intron
ENST00000558823 (EIF2AK4-009) 40030393-40035481 protein_coding
ENST00000559032 (EIF2AK4-008) 40021543-40026002 retained_intron
ENST00000559311 (EIF2AK4-006) 40002391-40008193 processed_transcript
ENST00000559624 (EIF2AK4-002) 39934146-39975429 protein_coding
ENST00000560648 (EIF2AK4-010) 39934176-39946895 protein_coding
ENST00000560855 (EIF2AK4-003) 39953975-40035591 protein_coding
ENST00000624709 (EIF2AK4-011) 39976979-39978292 TEC
ENSG00000166073 (GPR176)
G protein-coupled receptor 176 		ENST00000299092 (GPR176-002) 39799032-39920225 protein_coding
ENST00000543580 (GPR176-201) 39799023-39829276 protein_coding
ENST00000558041 (GPR176-003) 39801627-39919951 processed_transcript
ENST00000560729 (GPR176-004) 39801824-39894527 processed_transcript
ENST00000561100 (GPR176-001) 39800730-39920892 protein_coding
ENSG00000246863 (RP11-325N19.3)
 ENST00000499797 (RP11-325N19.3-001) 39921042-39924899 lincRNA
ENST00000558675 (RP11-325N19.3-002) 39921070-39925880 lincRNA
ENSG00000259389 (H3F3AP1)
H3 histone, family 3A pseudogene 1 		ENST00000559984 (H3F3AP1-001) 39951375-39951708 processed_pseudogene
ENSG00000259432 (RP11-37C7.2)
 ENST00000559899 (RP11-37C7.2-001) 39813223-39815429 sense_intronic
CIL_0006QT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040133-ENSMUSG00000005102 CGP 10090 2:118277110-118475234
GeneTranscriptPositionBiotype
ENSMUSG00000005102 (Eif2ak4)
eukaryotic translation initiation factor 2 alpha kinase 4 		ENSMUST00000005233 (Eif2ak4-001) 118388618-118475234 protein_coding
ENSMUST00000102527 (Eif2ak4-201) 118389112-118475231 protein_coding
ENSMUST00000110869 (Eif2ak4-006) 118438842-118452290 protein_coding
ENSMUST00000110870 (Eif2ak4-004) 118412346-118475234 protein_coding
ENSMUST00000110872 (Eif2ak4-003) 118389112-118475232 protein_coding
ENSMUST00000110874 (Eif2ak4-002) 118388847-118475234 protein_coding
ENSMUST00000110877 (Eif2ak4-005) 118388618-118428213 protein_coding
ENSMUST00000125281 (Eif2ak4-007) 118457160-118462094 processed_transcript
ENSMUSG00000040133 (Gpr176)
G protein-coupled receptor 176 		ENSMUST00000039160 (Gpr176-001) 118277110-118373419 protein_coding
ENSMUSG00000085889 (1700054M17Rik)
RIKEN cDNA 1700054M17 gene 		ENSMUST00000125654 (1700054M17Rik-001) 118304914-118308166 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QT_0001ENSG00000128829ENST00000263791ENST00000558557ENST00000558629ENST00000558743ENST00000558823ENST00000559032ENST00000559311ENST00000559624ENST00000560648ENST00000560855ENST00000624709ENSG00000166073ENST00000299092ENST00000543580ENST00000558041ENST00000560729ENST00000561100ENSG00000246863ENST00000499797ENST00000558675ENSG00000259389ENST00000559984ENSG00000259432ENST00000559899CIL_0006QT_0002ENSMUSG00000005102ENSMUST00000005233ENSMUST00000102527ENSMUST00000110869ENSMUST00000110870ENSMUST00000110872ENSMUST00000110874ENSMUST00000110877ENSMUST00000125281ENSMUSG00000040133ENSMUST00000039160ENSMUSG00000085889ENSMUST00000125654
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QT_0001ENSG00000128829ENST00000263791ENST00000558557ENST00000558823ENST00000559624ENST00000560855ENSG00000166073ENST00000299092ENST00000543580ENST00000561100ENSG00000246863ENST00000499797ENST00000558675ENSG00000259389ENST00000559984ENSG00000259432ENST00000559899CIL_0006QT_0002ENSMUSG00000005102ENSMUST00000005233ENSMUST00000102527ENSMUST00000110870ENSMUST00000110872ENSMUST00000110874ENSMUST00000125281ENSMUSG00000040133ENSMUST00000039160ENSMUSG00000085889ENSMUST00000125654
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128829 ENST00000263791 5.496±0.00 2.349±0.00 1.760±0.00 2.991±0.30 3.142±0.42 3.486±0.87 3.182±1.26 2.469±0.06 2.912±0.25 2.791±0.50 2.549±0.00 6.368±2.82 7.085±2.72 3.091±0.49
ENST00000558557 N/A N/A N/A N/A N/A N/A N/A 1.615±0.00 N/A N/A N/A N/A N/A N/A
ENST00000558629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558823 N/A 9.271±0.00 N/A N/A N/A N/A N/A 5.317±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559624 N/A N/A N/A N/A 1.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560855 3.466±0.00 4.005±0.00 N/A 2.096±0.00 5.315±0.00 1.536±0.00 N/A 2.622±0.00 1.671±0.00 0.707±0.00 0.389±0.00 1.100±0.00 2.094±0.12 2.920±0.00
ENST00000624709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166073 ENST00000299092 4.150±0.00 3.874±0.00 N/A 4.713±0.00 2.219±0.00 1.767±0.00 0.684±0.00 0.577±0.00 0.607±0.26 3.861±0.00 0.579±0.00 0.929±0.39 1.367±0.64 3.157±0.00
ENST00000543580 1.066±0.00 1.695±0.00 0.253±0.00 2.745±0.00 1.456±0.52 N/A 0.206±0.04 0.954±0.81 N/A 1.132±0.19 N/A 0.474±0.08 0.310±0.00 0.978±0.00
ENST00000558041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561100 N/A N/A 0.206±0.00 N/A N/A N/A 0.211±0.00 N/A 0.273±0.00 N/A N/A N/A N/A N/A
ENSG00000246863 ENST00000499797 0.008±0.00 0.072±0.00 N/A 0.060±0.03 0.030±0.02 0.048±0.00 0.071±0.00 0.044±0.00 N/A 0.021±0.01 N/A 0.017±0.01 0.024±0.01 2.793±1.40
ENST00000558675 N/A 0.014±0.00 N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.583±0.00
ENSG00000259389 ENST00000559984 0.043±0.00 N/A N/A N/A 1.287±0.00 0.198±0.00 N/A N/A N/A N/A N/A N/A N/A 0.118±0.00
ENSG00000259432 ENST00000559899 N/A N/A N/A N/A 0.504±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.130±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005102 ENSMUST00000005233 3.519±0.68 5.479±1.51 2.918±0.05 3.498±0.71 2.355±0.56 4.329±0.86 0.871±0.45 2.850±0.86 3.455±1.90 3.658±1.73 0.624±0.21 6.704±3.35 3.919±0.78 1.131±0.36
ENSMUST00000102527 1.085±0.00 N/A N/A 1.806±0.00 1.236±0.00 N/A 0.223±0.00 N/A 0.547±0.08 N/A 0.304±0.08 2.349±0.06 1.651±0.37 0.131±0.00
ENSMUST00000110869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110870 N/A N/A N/A 1.334±0.10 N/A 0.800±0.00 0.278±0.00 N/A N/A N/A N/A N/A N/A 0.329±0.09
ENSMUST00000110872 1.030±0.00 N/A N/A 0.996±0.00 1.054±0.00 N/A 0.218±0.00 N/A 0.535±0.08 N/A 0.294±0.07 2.307±0.06 1.611±0.36 0.120±0.00
ENSMUST00000110874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A N/A
ENSMUST00000110877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125281 N/A N/A N/A 15.669±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 11.450±4.72 3.279±0.00
ENSMUSG00000040133 ENSMUST00000039160 0.291±0.16 0.977±0.25 0.167±0.02 0.759±0.30 0.686±0.12 0.388±0.07 0.061±0.02 0.275±0.03 0.094±0.07 0.170±0.02 0.056±0.02 0.511±0.31 0.183±0.28 N/A
ENSMUSG00000085889 ENSMUST00000125654 N/A N/A N/A 0.108±0.00 0.187±0.00 N/A N/A N/A 0.140±0.10 N/A N/A N/A 0.131±0.00 1.933±0.45

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