| Transcript ID | Adipose | Breast | Colon | Testis |
|---|---|---|---|---|
| ENST00000559984 | 0.043±0.00 | 1.287±0.00 | 0.198±0.00 | 0.118±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | H3 histone, family 3A pseudogene 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000559984  |
H3F3AP1-001 |
ENSG00000259389 |
9606 | - |
15:39951375-39951708  |
processed_pseudogene |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W0 | CIL_0008W0_0001 | VISTA | 15:39791359-40393937 |
| CIL_0006QT | CIL_0006QT_0001 | CGP | 15:39799023-40035591 |
| CIL_0006QZ | CIL_0006QZ_0001 | CGP | 15:39934146-40039188 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000162814
|
H3f3a-003 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000161308
|
H3f3a-001 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000119546
|
H3f3a-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 350 |
|
ENSMUST00000119560
|
Gm12657-001 | processed_pseudogene | Mus_musculus | 0 | 346 |
|
ENSMUST00000119544
|
H3f3a-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 346 |
|
ENSMUST00000119459
|
H3f3c-001 | processed_pseudogene | Mus_musculus | 0 | 346 |
|
ENSMUST00000179671
|
Gm10257-201 | processed_pseudogene | Mus_musculus | 0 | 342 |
|
ENSMUST00000081026
|
H3f3a-006 | protein_coding | Mus_musculus | 0 | 339 |
|
ENSMUST00000077016
|
Gm6421-201 | processed_pseudogene | Mus_musculus | 0 | 335 |
|
ENSMUST00000169993
|
Gm17136-001 | processed_pseudogene | Mus_musculus | 0 | 331 |
|
ENSMUST00000121118
|
Gm13529-001 | processed_pseudogene | Mus_musculus | 0 | 329 |
|
ENSMUST00000120752
|
Gm3835-001 | processed_pseudogene | Mus_musculus | 0 | 320 |
|
ENSMUST00000171334
|
Gm4938-201 | processed_pseudogene | Mus_musculus | 0 | 320 |
|
ENSMUST00000179566
|
Gm6132-201 | processed_pseudogene | Mus_musculus | 0 | 320 |
|
ENSMUST00000121683
|
Gm12950-001 | processed_pseudogene | Mus_musculus | 0 | 318 |
|
ENSMUST00000159789
|
H3f3a-007 | protein_coding | Mus_musculus | 0 | 315 |
|
ENSMUST00000120136
|
Gm15763-001 | processed_pseudogene | Mus_musculus | 0 | 309 |
|
ENSMUST00000117894
|
Gm14529-001 | processed_pseudogene | Mus_musculus | 0 | 289 |
|
ENSMUST00000179046
|
Gm7426-201 | pseudogene | Mus_musculus | 0 | 263 |
|
ENSMUST00000118436
|
Gm13349-001 | processed_pseudogene | Mus_musculus | 0 | 255 |
|
ENSMUST00000119660
|
Gm8757-001 | processed_pseudogene | Mus_musculus | 0 | 241 |
|
ENSMUST00000120730
|
Gm15220-001 | processed_pseudogene | Mus_musculus | 0 | 237 |
|
ENSMUST00000186232
|
RP23-128A11.4-001 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000159441
|
H3f3a-005 | retained_intron | Mus_musculus | 0 | 228 |
|
ENSMUST00000174739
|
Gm20545-001 | processed_pseudogene | Mus_musculus | 0 | 220 |
|
ENSMUST00000121637
|
Gm14383-001 | processed_pseudogene | Mus_musculus | 0 | 196 |
|
ENSMUST00000137042
|
Gm15905-001 | processed_pseudogene | Mus_musculus | 8.96831e-44 | 180 |
