C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373626 RPS4X-002 ENSG00000198034 9606 - X:72274255-72277248 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066A CIL_00066A_0001 CGP X:72181353-72302926
CIL_0006RO CIL_0006RO_0001 CGP X:72204657-72277300
CIL_0000YL CIL_0000YL_0002 CGP X:72255679-72307187

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 514
ENSMUST00000119790 Gm13680-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000183728 Gm15013-002 protein_coding Mus_musculus 0 438
ENSMUST00000183537 Gm15013-001 translated_processed_pseudogene Mus_musculus 0 438
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 2e-32 143

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